sct_check_dependencies 

--
Spinal Cord Toolbox (4.2.2)

SCT info:
- version: 4.2.2
- path: /data/u_mkaptan_software/SpinalCord_version422/spinalcordtoolbox-4.2.2
OS: linux (Linux-5.4.0-62-generic-x86_64-with-debian-buster-sid)
CPU cores: Available: 256, Used by SCT: 256
RAM: MemTotal:       1056725152 kB
total        used        free      shared  buff/cache   available
Mem:        1031958       21464      954671          18       55822     1005956
Swap:          9536           0        9536
Check Python executable.............................[OK]
  Using bundled python 3.6.12 |Anaconda, Inc.| (default, Sep  8 2020, 23:10:56) 
[GCC 7.3.0] at /data/u_mkaptan_software/SpinalCord_version422/spinalcordtoolbox-4.2.2/python/envs/venv_sct/bin/python
Check if data are installed.........................[OK]
Check if numpy is installed.........................[OK] (1.17.4)
Check if cryptography is installed..................[OK] (2.8)
Check if dipy is installed..........................[OK] (1.0.0)
Check if futures is installed.......................[OK]
Check if h5py is installed..........................[OK] (2.10.0)
Check if Keras is installed.........................[OK] (2.3.1)
Check if matplotlib is installed....................[OK] (3.1.2)
Check if nibabel is installed.......................[OK] (3.0.0)
Check if pandas is installed........................[OK] (0.25.3)
Check if psutil is installed........................[OK] (5.6.7)
Check if pyqt5 (5.11.3) is installed................[OK]
Check if pytest is installed........................[OK] (5.3.2)
Check if pytest-cov is installed....................[OK] (2.8.1)
Check if raven is installed.........................[OK]
Check if requests is installed......................[OK] (2.22.0)
Check if scipy is installed.........................[OK] (1.4.0)
Check if scikit-image is installed..................[OK] (0.16.2)
Check if scikit-learn is installed..................[OK] (0.22)
Check if tensorflow is installed....................[OK] (2.0.1)
Check if xlrd is installed..........................[OK] (1.2.0)
Check if xlutils is installed.......................[OK]
Check if xlwt is installed..........................[OK] (1.3.0)
Check if tqdm is installed..........................[OK] (4.40.2)
Check if transforms3d is installed..................[OK] (0.3.1)
Check if urllib3[secure] is installed...............[OK] (1.25.7)
Check if spinalcordtoolbox is installed.............[OK]
Check ANTs compatibility with OS ...................[OK]
Check PropSeg compatibility with OS ................[OK]
Check if DISPLAY variable is set....................[OK]
Check if figure can be opened with PyQt.............[OK]