-- Spinal Cord Toolbox (5.3.0) sct_propseg -i stiched_spine.nii.gz -c t2 -CSF -v 2 -- Loaded /home/stefan/sdintegration/pythonPlugin/test/__main__.Test.test_verify/Output/analysisFolder/stiched_spine.nii.gz orientation ASL shape (271, 690, 61) Loaded /home/stefan/sdintegration/pythonPlugin/test/__main__.Test.test_verify/Output/analysisFolder/stiched_spine.nii.gz orientation ASL shape (271, 690, 61) Creating temporary folder (/tmp/sct-20210606215726.633945-label_vertebrae-d25ipd1l) Creating temporary folder (/tmp/sct-20210606215726.828915-propseg-4o3z7wmx) Detecting the spinal cord using OptiC Creating temporary folder (/tmp/sct-20210606215727.296219-gh18z1ng) Saving image to img_rpi_uint16.nii (/tmp/sct-20210606215727.296219-gh18z1ng/img_rpi_uint16.nii) orientation RPI shape (61, 271, 690) Loaded img_rpi_uint16_optic_ctr.hdr (/tmp/sct-20210606215727.296219-gh18z1ng/img_rpi_uint16_optic_ctr.hdr) orientation RPI shape (61, 271, 690) Saving image to /tmp/sct-20210606215726.633945-label_vertebrae-d25ipd1l/centerline_optic.nii.gz orientation ASL shape (271, 690, 61) /mnt/algo/sct_5.3.0/bin/isct_propseg -t t2 -o . -verbose -mesh -centerline-binary -CSF -centerline-coord -cross -init-tube -low-resolution-mesh -i /tmp/sct-20210606215726.828915-propseg-4o3z7wmx/stiched_spine_rescaled.nii.gz -init-centerline /tmp/sct-20210606215726.633945-label_vertebrae-d25ipd1l/centerline_optic.nii.gz -centerline-binary # in /home/stefan/sdintegration/pythonPlugin/test/__main__.Test.test_verify/Output/analysisFolder output => Initialization - using given centerline output => Total propagation length = 627.744 mm output => output => output => Initial deformation : 90 points and 150 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 50 iterations, 273 evaluations. Cost function reported error46602.9/3831.63 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.33407 output => Most promising points mean distance [mm] = -0.12 output => Most promising points absolute mean distance [mm] = 0.229333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 95 iterations, 1170 evaluations. Cost function reported error615203/613504 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.40114 output => Distance from last mesh [mm] = 0.198987 output => Most promising points mean distance [mm] = -0.0213333 output => Most promising points absolute mean distance [mm] = 0.141333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 70 evaluations. Cost function reported error754231/754150 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.41013 output => Distance from last mesh [mm] = 0.036493 output => output => Propagation step 1/200 output => Propagation length [mm] : 8.02949 / 800 output => Contrast = 651.361 output => Iteration Position = ( -18.331, 67.8527, -303.682 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 431 iterations, 5189 evaluations. Cost function reported error1242.01/824.479 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.134157 output => Number of bad orientation = 0 / 1 output => Contrast : 350.454 / 50 output => Distance of segmentation [mm] = 14.0298 output => output => Propagation step 2/200 output => Propagation length [mm] : 14.0298 / 800 output => Contrast = 605.892 output => Iteration Position = ( -18.5777, 68.0305, -309.674 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 65 iterations, 716 evaluations. Cost function reported error2092.2/1172.55 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.186223 output => Number of bad orientation = 0 / 2 output => Contrast : 485.751 / 50 output => Distance of segmentation [mm] = 20.0221 output => output => Propagation step 3/200 output => Propagation length [mm] : 20.0221 / 800 output => Contrast = 594.557 output => Iteration Position = ( -18.8264, 68.0612, -315.66 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 152 iterations, 1497 evaluations. Cost function reported error4381.36/2218.37 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.289172 output => Number of bad orientation = 0 / 3 output => Contrast : 617.27 / 50 output => Distance of segmentation [mm] = 26.0333 output => output => Propagation step 4/200 output => Propagation length [mm] : 26.0333 / 800 output => Contrast = 604.355 output => Iteration Position = ( -19.1268, 68.0649, -321.658 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 151 iterations, 1846 evaluations. Cost function reported error1498.6/997.631 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.140248 output => Number of bad orientation = 0 / 4 output => Contrast : 601.601 / 50 output => Distance of segmentation [mm] = 32.0294 output => output => Propagation step 5/200 output => Propagation length [mm] : 32.0294 / 800 output => Contrast = 595.325 output => Iteration Position = ( -19.4506, 68.0054, -327.642 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 70 evaluations. Cost function reported error1068.75/745.202 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.11443 output => Number of bad orientation = 0 / 5 output => Contrast : 598.079 / 50 output => Distance of segmentation [mm] = 38.0258 output => output => Propagation step 6/200 output => Propagation length [mm] : 38.0258 / 800 output => Contrast = 530.644 output => Iteration Position = ( -19.7151, 67.976, -333.63 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 88 iterations, 1051 evaluations. Cost function reported error1768.19/1331.87 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.131094 output => Number of bad orientation = 0 / 6 output => Contrast : 576.774 / 50 output => Distance of segmentation [mm] = 44.0111 output => output => Propagation step 7/200 output => Propagation length [mm] : 44.0111 / 800 output => Contrast = 477.297 output => Iteration Position = ( -20.0371, 67.924, -339.603 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 189 iterations, 1693 evaluations. Cost function reported error3141.3/1320.81 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.356297 output => Number of bad orientation = 0 / 7 output => Contrast : 534.422 / 50 output => Distance of segmentation [mm] = 49.9741 output => output => Propagation step 8/200 output => Propagation length [mm] : 49.9741 / 800 output => Contrast = 503.49 output => Iteration Position = ( -20.2824, 67.6895, -345.55 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 196 iterations, 2317 evaluations. Cost function reported error1302.56/891.178 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.170826 output => Number of bad orientation = 0 / 8 output => Contrast : 503.81 / 50 output => Distance of segmentation [mm] = 55.9422 output => output => Propagation step 9/200 output => Propagation length [mm] : 55.9422 / 800 output => Contrast = 445.469 output => Iteration Position = ( -20.5109, 67.6859, -351.5 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 353 iterations, 3419 evaluations. Cost function reported error1855.36/712.321 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.25794 output => Number of bad orientation = 0 / 9 output => Contrast : 475.419 / 50 output => Distance of segmentation [mm] = 61.928 output => output => Propagation step 10/200 output => Propagation length [mm] : 61.928 / 800 output => Contrast = 315.53 output => Iteration Position = ( -20.5853, 67.5991, -357.472 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 26 iterations, 241 evaluations. Cost function reported error1847.9/914.332 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.224927 output => Number of bad orientation = 0 / 10 output => Contrast : 421.496 / 50 output => Distance of segmentation [mm] = 67.875 output => output => Propagation step 11/200 output => Propagation length [mm] : 67.875 / 800 output => Contrast = 358.822 output => Iteration Position = ( -21.1183, 67.5022, -363.392 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 70 iterations, 802 evaluations. Cost function reported error2773.83/1282.62 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.26868 output => Number of bad orientation = 0 / 11 output => Contrast : 373.274 / 50 output => Distance of segmentation [mm] = 73.8563 output => output => Propagation step 12/200 output => Propagation length [mm] : 73.8563 / 800 output => Contrast = 411.463 output => Iteration Position = ( -21.3519, 67.3272, -369.358 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 110 iterations, 952 evaluations. Cost function reported error5225.11/2122.27 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.406985 output => Most promising points mean distance [mm] = 0.0555556 output => Most promising points absolute mean distance [mm] = 0.18 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 401 iterations, 4635 evaluations. Cost function reported error230223/230195 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.423425 output => Distance from last mesh [mm] = 0.0278899 output => Number of bad orientation = 0 / 12 output => Contrast : 361.938 / 50 output => Distance of segmentation [mm] = 79.8152 output => output => Propagation step 13/200 output => Propagation length [mm] : 79.8152 / 800 output => Contrast = 485.559 output => Iteration Position = ( -21.6879, 67.3054, -375.282 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 430 iterations, 4745 evaluations. Cost function reported error3959.88/1641.25 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.368531 output => Number of bad orientation = 0 / 13 output => Contrast : 418.615 / 50 output => Distance of segmentation [mm] = 85.7848 output => output => Propagation step 14/200 output => Propagation length [mm] : 85.7848 / 800 output => Contrast = 511.944 output => Iteration Position = ( -21.9538, 67.1204, -381.237 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 202 iterations, 1867 evaluations. Cost function reported error2687.68/1051.56 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.389257 output => Number of bad orientation = 0 / 14 output => Contrast : 469.655 / 50 output => Distance of segmentation [mm] = 91.7733 output => output => Propagation step 15/200 output => Propagation length [mm] : 91.7733 / 800 output => Contrast = 475.376 output => Iteration Position = ( -22.0155, 67.0561, -387.214 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 213 iterations, 1644 evaluations. Cost function reported error4126.9/1506.24 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.432707 output => Most promising points mean distance [mm] = 0.00666667 output => Most promising points absolute mean distance [mm] = 0.117778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 7 iterations, 85 evaluations. Cost function reported error559527/559480 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.429865 output => Distance from last mesh [mm] = 0.0442643 output => Number of bad orientation = 0 / 15 output => Contrast : 490.96 / 50 output => Distance of segmentation [mm] = 97.7114 output => output => Propagation step 16/200 output => Propagation length [mm] : 97.7114 / 800 output => Contrast = 463.593 output => Iteration Position = ( -22.2833, 66.8909, -393.123 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 197 iterations, 1592 evaluations. Cost function reported error7479.63/2314.72 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.75025 output => Most promising points mean distance [mm] = 0.0222222 output => Most promising points absolute mean distance [mm] = 0.208889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 3 iterations, 67 evaluations. Cost function reported error1.58636e+06/1.58636e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.75025 output => Distance from last mesh [mm] = 2.24565e-06 output => Number of bad orientation = 0 / 16 output => Contrast : 483.638 / 50 output => Distance of segmentation [mm] = 103.457 output => output => Propagation step 17/200 output => Propagation length [mm] : 103.457 / 800 output => Contrast = 517.195 output => Iteration Position = ( -22.2106, 66.4651, -398.814 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 33 iterations, 125 evaluations. Cost function reported error16061.1/3981.62 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.959994 output => Most promising points mean distance [mm] = 0.117778 output => Most promising points absolute mean distance [mm] = 0.224444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 1 iterations, 65 evaluations. Cost function reported error3.68291e+06/3.68291e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.959994 output => Distance from last mesh [mm] = 0 output => Number of bad orientation = 0 / 17 output => Contrast : 485.388 / 50 output => Distance of segmentation [mm] = 109.252 output => output => Propagation step 18/200 output => Propagation length [mm] : 109.252 / 800 output => Contrast = 540.314 output => Iteration Position = ( -22.7028, 65.7671, -404.488 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 36 iterations, 239 evaluations. Cost function reported error18548.7/4080.37 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.14939 output => Most promising points mean distance [mm] = 0.168889 output => Most promising points absolute mean distance [mm] = 0.262222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 3 iterations, 68 evaluations. Cost function reported error2.66529e+06/2.66529e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.1494 output => Distance from last mesh [mm] = 1.10002e-05 output => Number of bad orientation = 0 / 18 output => Contrast : 507.034 / 50 output => Distance of segmentation [mm] = 115.26 output => output => Propagation step 19/200 output => Propagation length [mm] : 115.26 / 800 output => Contrast = 479.795 output => Iteration Position = ( -23.0945, 65.2859, -410.414 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 500 iterations, 5604 evaluations. Cost function reported error2905.15/960.46 . Final step size = 7.99192e-09 output => output => Distance from initial mesh [mm] = 0.342599 output => Number of bad orientation = 0 / 19 output => Contrast : 512.435 / 50 output => Distance of segmentation [mm] = 121.264 output => output => Propagation step 20/200 output => Propagation length [mm] : 121.264 / 800 output => Contrast = 430.291 output => Iteration Position = ( -23.4038, 64.8014, -416.334 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 38 iterations, 144 evaluations. Cost function reported error5021.4/1495.81 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.536436 output => Most promising points mean distance [mm] = 0.0622222 output => Most promising points absolute mean distance [mm] = 0.168889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 8 iterations, 28 evaluations. Cost function reported error166002/165679 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.578017 output => Distance from last mesh [mm] = 0.131285 output => Number of bad orientation = 0 / 20 output => Contrast : 483.467 / 50 output => Distance of segmentation [mm] = 127.142 output => output => Propagation step 21/200 output => Propagation length [mm] : 127.142 / 800 output => Contrast = 388.601 output => Iteration Position = ( -24.033, 64.4553, -422.128 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 34 iterations, 213 evaluations. Cost function reported error8861.28/3093.79 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.863094 output => Most promising points mean distance [mm] = 0.0866667 output => Most promising points absolute mean distance [mm] = 0.255556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 153 iterations, 1794 evaluations. Cost function reported error121232/121088 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.923166 output => Distance from last mesh [mm] = 0.127652 output => Number of bad orientation = 0 / 21 output => Contrast : 432.896 / 50 output => Distance of segmentation [mm] = 132.883 output => output => Propagation step 22/200 output => Propagation length [mm] : 132.883 / 800 output => Contrast = 393.02 output => Iteration Position = ( -24.3609, 64.2229, -427.847 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 305 iterations, 3196 evaluations. Cost function reported error9217.83/2853.1 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.643017 output => Most promising points mean distance [mm] = 0.104444 output => Most promising points absolute mean distance [mm] = 0.26 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 101 evaluations. Cost function reported error2.55895e+06/2.55894e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.643017 output => Distance from last mesh [mm] = 8.26518e-07 output => Number of bad orientation = 0 / 22 output => Contrast : 403.971 / 50 output => Distance of segmentation [mm] = 138.538 output => output => Propagation step 23/200 output => Propagation length [mm] : 138.538 / 800 output => Contrast = 389.946 output => Iteration Position = ( -24.646, 63.5291, -433.434 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 92 iterations, 767 evaluations. Cost function reported error17654.2/4519.73 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.882634 output => Most promising points mean distance [mm] = 0.0311111 output => Most promising points absolute mean distance [mm] = 0.315556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 1 iterations, 64 evaluations. Cost function reported error4.88586e+06/4.88586e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.882634 output => Distance from last mesh [mm] = 3.17891e-08 output => Number of bad orientation = 0 / 23 output => Contrast : 390.522 / 50 output => Distance of segmentation [mm] = 144.321 output => output => Propagation step 24/200 output => Propagation length [mm] : 144.321 / 800 output => Contrast = 419.148 output => Iteration Position = ( -24.8132, 62.6528, -439.128 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 85 iterations, 753 evaluations. Cost function reported error17527.3/3098.25 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.01015 output => Most promising points mean distance [mm] = 0.0533333 output => Most promising points absolute mean distance [mm] = 0.222222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 18 iterations, 190 evaluations. Cost function reported error1.23304e+06/1.233e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.02717 output => Distance from last mesh [mm] = 0.0297178 output => Number of bad orientation = 0 / 24 output => Contrast : 400.704 / 50 output => Distance of segmentation [mm] = 150.123 output => output => Propagation step 25/200 output => Propagation length [mm] : 150.123 / 800 output => Contrast = 420.301 output => Iteration Position = ( -25.2022, 61.8054, -444.796 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 277 iterations, 2040 evaluations. Cost function reported error8956.73/2532.53 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.732324 output => Most promising points mean distance [mm] = 0.0555556 output => Most promising points absolute mean distance [mm] = 0.215556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 3 iterations, 66 evaluations. Cost function reported error251827/251734 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.74892 output => Distance from last mesh [mm] = 0.0555428 output => Number of bad orientation = 0 / 25 output => Contrast : 409.798 / 50 output => Distance of segmentation [mm] = 155.955 output => output => Propagation step 26/200 output => Propagation length [mm] : 155.955 / 800 output => Contrast = 390.266 output => Iteration Position = ( -25.5583, 61.5302, -450.578 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 40 iterations, 328 evaluations. Cost function reported error3623.47/2163.71 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.333193 output => Number of bad orientation = 0 / 26 output => Contrast : 409.905 / 50 output => Distance of segmentation [mm] = 161.676 output => output => Propagation step 27/200 output => Propagation length [mm] : 161.676 / 800 output => Contrast = 422.222 output => Iteration Position = ( -25.9734, 61.491, -456.265 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 43 iterations, 393 evaluations. Cost function reported error5234.44/3411.33 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.345254 output => Number of bad orientation = 0 / 27 output => Contrast : 410.93 / 50 output => Distance of segmentation [mm] = 167.416 output => output => Propagation step 28/200 output => Propagation length [mm] : 167.416 / 800 output => Contrast = 418.316 output => Iteration Position = ( -26.1258, 60.7931, -461.93 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 26 iterations, 114 evaluations. Cost function reported error12626.4/4171.45 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.687857 output => Most promising points mean distance [mm] = 0.0422222 output => Most promising points absolute mean distance [mm] = 0.371111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 2 iterations, 65 evaluations. Cost function reported error3.08392e+06/3.08392e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.687858 output => Distance from last mesh [mm] = 1.29888e-06 output => Number of bad orientation = 0 / 28 output => Contrast : 410.268 / 50 output => Distance of segmentation [mm] = 173.138 output => output => Propagation step 29/200 output => Propagation length [mm] : 173.138 / 800 output => Contrast = 451.105 output => Iteration Position = ( -26.3092, 59.7542, -467.521 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 195 iterations, 1885 evaluations. Cost function reported error12356.8/3585.86 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.758715 output => Most promising points mean distance [mm] = -0.00444444 output => Most promising points absolute mean distance [mm] = 0.315556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 73 evaluations. Cost function reported error2.59282e+06/2.5928e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.770321 output => Distance from last mesh [mm] = 0.0196309 output => Number of bad orientation = 0 / 29 output => Contrast : 430.548 / 50 output => Distance of segmentation [mm] = 178.925 output => output => Propagation step 30/200 output => Propagation length [mm] : 178.925 / 800 output => Contrast = 515.978 output => Iteration Position = ( -26.642, 58.7395, -473.176 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 196 iterations, 1020 evaluations. Cost function reported error7937.14/3135.26 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.804046 output => Most promising points mean distance [mm] = 0.0177778 output => Most promising points absolute mean distance [mm] = 0.266667 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 7 iterations, 79 evaluations. Cost function reported error354898/354530 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.923918 output => Distance from last mesh [mm] = 0.20139 output => Number of bad orientation = 0 / 30 output => Contrast : 461.8 / 50 output => Distance of segmentation [mm] = 184.868 output => output => Propagation step 31/200 output => Propagation length [mm] : 184.868 / 800 output => Contrast = 540.186 output => Iteration Position = ( -26.9208, 58.1004, -478.994 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 182 iterations, 1204 evaluations. Cost function reported error4620.78/2738.85 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.526852 output => Most promising points mean distance [mm] = -0.0866667 output => Most promising points absolute mean distance [mm] = 0.268889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 8 iterations, 73 evaluations. Cost function reported error588444/588418 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.537902 output => Distance from last mesh [mm] = 0.0241696 output => Number of bad orientation = 0 / 31 output => Contrast : 502.423 / 50 output => Distance of segmentation [mm] = 190.686 output => output => Propagation step 32/200 output => Propagation length [mm] : 190.686 / 800 output => Contrast = 508.485 output => Iteration Position = ( -27.6039, 57.8986, -484.744 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 77 iterations, 231 evaluations. Cost function reported error8021.2/3112.08 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.775596 output => Most promising points mean distance [mm] = -0.193333 output => Most promising points absolute mean distance [mm] = 0.313333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 166 iterations, 2134 evaluations. Cost function reported error1.05095e+06/1.05091e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.807163 output => Distance from last mesh [mm] = 0.0466401 output => Number of bad orientation = 0 / 32 output => Contrast : 521.55 / 50 output => Distance of segmentation [mm] = 196.452 output => output => Propagation step 33/200 output => Propagation length [mm] : 196.452 / 800 output => Contrast = 413.385 output => Iteration Position = ( -27.6969, 57.5745, -490.484 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 59 iterations, 199 evaluations. Cost function reported error6280.82/3276.87 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.541839 output => Most promising points mean distance [mm] = -0.108889 output => Most promising points absolute mean distance [mm] = 0.344444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 100 evaluations. Cost function reported error699192/699186 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.554039 output => Distance from last mesh [mm] = 0.0195982 output => Number of bad orientation = 0 / 33 output => Contrast : 487.352 / 50 output => Distance of segmentation [mm] = 202.186 output => output => Propagation step 34/200 output => Propagation length [mm] : 202.186 / 800 output => Contrast = 383.285 output => Iteration Position = ( -27.9709, 56.8353, -496.138 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 14 iterations, 46 evaluations. Cost function reported error15332.3/4667.95 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.1131 output => Most promising points mean distance [mm] = -0.182222 output => Most promising points absolute mean distance [mm] = 0.444444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 1 iterations, 56 evaluations. Cost function reported error1.43339e+06/1.43301e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.18154 output => Distance from last mesh [mm] = 0.113033 output => Number of bad orientation = 0 / 34 output => Contrast : 435.052 / 50 output => Distance of segmentation [mm] = 208.014 output => output => Propagation step 35/200 output => Propagation length [mm] : 208.014 / 800 output => Contrast = 414.153 output => Iteration Position = ( -27.9689, 55.5081, -501.645 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 159 iterations, 1553 evaluations. Cost function reported error6432.06/2482.7 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.07156 output => Most promising points mean distance [mm] = -0.157778 output => Most promising points absolute mean distance [mm] = 0.366667 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 2 iterations, 64 evaluations. Cost function reported error182948/182754 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.11924 output => Distance from last mesh [mm] = 0.0782658 output => Number of bad orientation = 0 / 35 output => Contrast : 403.608 / 50 output => Distance of segmentation [mm] = 214.16 output => output => Propagation step 36/200 output => Propagation length [mm] : 214.16 / 800 output => Contrast = 461.287 output => Iteration Position = ( -28.4514, 55.2583, -507.656 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 290 iterations, 3050 evaluations. Cost function reported error3264.48/1838.12 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.392825 output => Number of bad orientation = 0 / 36 output => Contrast : 419.575 / 50 output => Distance of segmentation [mm] = 220.358 output => output => Propagation step 37/200 output => Propagation length [mm] : 220.358 / 800 output => Contrast = 462.696 output => Iteration Position = ( -28.743, 54.822, -513.703 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 22 iterations, 104 evaluations. Cost function reported error12080.4/4675.72 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.816904 output => Most promising points mean distance [mm] = -0.104444 output => Most promising points absolute mean distance [mm] = 0.335556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 2 iterations, 65 evaluations. Cost function reported error8.46232e+06/8.46232e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.816905 output => Distance from last mesh [mm] = 1.72617e-06 output => Number of bad orientation = 0 / 37 output => Contrast : 446.045 / 50 output => Distance of segmentation [mm] = 226.445 output => output => Propagation step 38/200 output => Propagation length [mm] : 226.445 / 800 output => Contrast = 355.235 output => Iteration Position = ( -29.2695, 55.159, -519.663 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 365 iterations, 3536 evaluations. Cost function reported error9439.87/3564.01 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.681868 output => Most promising points mean distance [mm] = -0.191111 output => Most promising points absolute mean distance [mm] = 0.288889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 25 iterations, 263 evaluations. Cost function reported error1.46858e+06/1.46852e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.709187 output => Distance from last mesh [mm] = 0.0380786 output => Number of bad orientation = 0 / 38 output => Contrast : 426.406 / 50 output => Distance of segmentation [mm] = 232.579 output => output => Propagation step 39/200 output => Propagation length [mm] : 232.579 / 800 output => Contrast = 392.315 output => Iteration Position = ( -29.4824, 54.8847, -525.733 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 31 iterations, 145 evaluations. Cost function reported error12409.9/4766.39 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.19807 output => Most promising points mean distance [mm] = -0.0622222 output => Most promising points absolute mean distance [mm] = 0.431111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 3 iterations, 66 evaluations. Cost function reported error2.15603e+07/2.15603e+07 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.19807 output => Distance from last mesh [mm] = 2.85421e-06 output => Number of bad orientation = 0 / 39 output => Contrast : 403.416 / 50 output => Distance of segmentation [mm] = 239.484 output => output => Propagation step 40/200 output => Propagation length [mm] : 239.484 / 800 output => Contrast = 415.946 output => Iteration Position = ( -29.8113, 54.501, -532.416 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 60 iterations, 192 evaluations. Cost function reported error13218/4101.15 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.973246 output => Most promising points mean distance [mm] = -0.0288889 output => Most promising points absolute mean distance [mm] = 0.402222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 1 iterations, 64 evaluations. Cost function reported error7.25582e+06/7.25582e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.973246 output => Distance from last mesh [mm] = 9.53674e-08 output => Number of bad orientation = 0 / 40 output => Contrast : 387.832 / 50 output => Distance of segmentation [mm] = 245.626 output => output => Propagation step 41/200 output => Propagation length [mm] : 245.626 / 800 output => Contrast = 448.863 output => Iteration Position = ( -30.1589, 54.944, -538.309 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 27 iterations, 152 evaluations. Cost function reported error10730.1/3149.76 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.909586 output => Most promising points mean distance [mm] = -0.211111 output => Most promising points absolute mean distance [mm] = 0.308889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 185 iterations, 1898 evaluations. Cost function reported error366060/365154 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.07319 output => Distance from last mesh [mm] = 0.21251 output => Number of bad orientation = 0 / 41 output => Contrast : 419.042 / 50 output => Distance of segmentation [mm] = 251.975 output => output => Propagation step 42/200 output => Propagation length [mm] : 251.975 / 800 output => Contrast = 433.045 output => Iteration Position = ( -30.3231, 56.0474, -544.365 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 47 iterations, 229 evaluations. Cost function reported error17578.2/5861.89 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.985654 output => Most promising points mean distance [mm] = -0.133333 output => Most promising points absolute mean distance [mm] = 0.404444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 102 evaluations. Cost function reported error2.45371e+06/2.45369e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.00523 output => Distance from last mesh [mm] = 0.0267011 output => Number of bad orientation = 0 / 42 output => Contrast : 432.618 / 50 output => Distance of segmentation [mm] = 258.122 output => output => Propagation step 43/200 output => Propagation length [mm] : 258.122 / 800 output => Contrast = 431.316 output => Iteration Position = ( -30.7558, 57.8224, -550.109 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 326 iterations, 3590 evaluations. Cost function reported error13771.9/5915.87 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.925676 output => Most promising points mean distance [mm] = -0.113333 output => Most promising points absolute mean distance [mm] = 0.424444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 76 evaluations. Cost function reported error2.95361e+06/2.95342e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.992027 output => Distance from last mesh [mm] = 0.0829444 output => Number of bad orientation = 0 / 43 output => Contrast : 437.741 / 50 output => Distance of segmentation [mm] = 264.383 output => output => Propagation step 44/200 output => Propagation length [mm] : 264.383 / 800 output => Contrast = 468.588 output => Iteration Position = ( -31.0327, 58.8093, -556.151 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 100 iterations, 842 evaluations. Cost function reported error11833.9/6395.57 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.719023 output => Most promising points mean distance [mm] = -0.0777778 output => Most promising points absolute mean distance [mm] = 0.468889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 77 evaluations. Cost function reported error1.30882e+06/1.30797e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.817497 output => Distance from last mesh [mm] = 0.140426 output => Number of bad orientation = 0 / 44 output => Contrast : 444.316 / 50 output => Distance of segmentation [mm] = 270.63 output => output => Propagation step 45/200 output => Propagation length [mm] : 270.63 / 800 output => Contrast = 443.74 output => Iteration Position = ( -31.0518, 60.3434, -562.03 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 125 iterations, 887 evaluations. Cost function reported error22173.8/6666.44 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.23194 output => Most promising points mean distance [mm] = -0.0711111 output => Most promising points absolute mean distance [mm] = 0.408889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 6 iterations, 72 evaluations. Cost function reported error1.03992e+07/1.03992e+07 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.23196 output => Distance from last mesh [mm] = 4.15081e-05 output => Number of bad orientation = 0 / 45 output => Contrast : 447.881 / 50 output => Distance of segmentation [mm] = 277.137 output => output => Propagation step 46/200 output => Propagation length [mm] : 277.137 / 800 output => Contrast = 409.158 output => Iteration Position = ( -31.5276, 62.1407, -567.998 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 36 iterations, 183 evaluations. Cost function reported error15632.9/5136.75 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.01436 output => Most promising points mean distance [mm] = -0.233333 output => Most promising points absolute mean distance [mm] = 0.402222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 2 iterations, 66 evaluations. Cost function reported error5.99696e+06/5.99696e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.01436 output => Distance from last mesh [mm] = 1.81613e-06 output => Number of bad orientation = 0 / 46 output => Contrast : 440.495 / 50 output => Distance of segmentation [mm] = 283.308 output => output => Propagation step 47/200 output => Propagation length [mm] : 283.308 / 800 output => Contrast = 450.4 output => Iteration Position = ( -31.1631, 64.8987, -573.4 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 185 iterations, 2166 evaluations. Cost function reported error15176.1/3795.28 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.35211 output => Most promising points mean distance [mm] = -0.148889 output => Most promising points absolute mean distance [mm] = 0.331111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 1 iterations, 62 evaluations. Cost function reported error1.33815e+07/1.33815e+07 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.35211 output => Distance from last mesh [mm] = 1.00798e-06 output => Number of bad orientation = 0 / 47 output => Contrast : 434.433 / 50 output => Distance of segmentation [mm] = 289.388 output => output => Propagation step 48/200 output => Propagation length [mm] : 289.388 / 800 output => Contrast = 452.77 output => Iteration Position = ( -30.8732, 68.1827, -578.497 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 251 iterations, 1565 evaluations. Cost function reported error13262.7/5461.48 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.05985 output => Most promising points mean distance [mm] = 0.0466667 output => Most promising points absolute mean distance [mm] = 0.384444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 70 evaluations. Cost function reported error1.58275e+06/1.57888e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.33302 output => Distance from last mesh [mm] = 0.57649 output => Most promising points mean distance [mm] = -0.0266667 output => Most promising points absolute mean distance [mm] = 0.364444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 9 iterations, 112 evaluations. Cost function reported error312617/311326 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.40211 output => Distance from last mesh [mm] = 0.245225 output => Number of bad orientation = 0 / 48 output => Contrast : 437.443 / 50 output => Distance of segmentation [mm] = 293.575 output => output => Propagation step 49/200 output => Propagation length [mm] : 293.575 / 800 output => Contrast = 384.95 output => Iteration Position = ( -31.5057, 69.7091, -582.031 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 125 iterations, 1204 evaluations. Cost function reported error17514/8069.08 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.870645 output => Most promising points mean distance [mm] = 0.224444 output => Most promising points absolute mean distance [mm] = 0.473333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 74 evaluations. Cost function reported error1.39967e+06/1.39912e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.908211 output => Distance from last mesh [mm] = 0.132607 output => Number of bad orientation = 0 / 49 output => Contrast : 429.373 / 50 output => Distance of segmentation [mm] = 299.279 output => output => Propagation step 50/200 output => Propagation length [mm] : 299.279 / 800 output => Contrast = 383.67 output => Iteration Position = ( -30.8506, 71.1015, -587.478 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 83 iterations, 864 evaluations. Cost function reported error20703.3/4976.72 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.31409 output => Most promising points mean distance [mm] = 0.375556 output => Most promising points absolute mean distance [mm] = 0.54 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 100 iterations, 1250 evaluations. Cost function reported error2.73889e+06/2.73799e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.46945 output => Distance from last mesh [mm] = 0.24114 output => Number of bad orientation = 0 / 50 output => Contrast : 407.13 / 50 output => Distance of segmentation [mm] = 304.901 output => output => Propagation step 51/200 output => Propagation length [mm] : 304.901 / 800 output => Contrast = 485.623 output => Iteration Position = ( -30.6565, 73.7158, -592.418 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 81 iterations, 622 evaluations. Cost function reported error7489.23/2996.24 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.720547 output => Most promising points mean distance [mm] = 0.117778 output => Most promising points absolute mean distance [mm] = 0.464444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 2 iterations, 12 evaluations. Cost function reported error971813/971323 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.843529 output => Distance from last mesh [mm] = 0.21617 output => Number of bad orientation = 0 / 51 output => Contrast : 418.081 / 50 output => Distance of segmentation [mm] = 310.256 output => output => Propagation step 52/200 output => Propagation length [mm] : 310.256 / 800 output => Contrast = 523.471 output => Iteration Position = ( -30.442, 76.1804, -597.145 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 39 iterations, 182 evaluations. Cost function reported error5489.37/1888.35 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.692975 output => Most promising points mean distance [mm] = 0.0844444 output => Most promising points absolute mean distance [mm] = 0.266667 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 96 evaluations. Cost function reported error1.23793e+06/1.23783e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.717429 output => Distance from last mesh [mm] = 0.0593768 output => Number of bad orientation = 0 / 52 output => Contrast : 464.254 / 50 output => Distance of segmentation [mm] = 315.683 output => output => Propagation step 53/200 output => Propagation length [mm] : 315.683 / 800 output => Contrast = 424.912 output => Iteration Position = ( -30.3784, 78.6112, -601.984 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 25 iterations, 121 evaluations. Cost function reported error7675.64/1461.66 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.07186 output => Most promising points mean distance [mm] = 0.0955556 output => Most promising points absolute mean distance [mm] = 0.22 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 0 iterations, 53 evaluations. Cost function reported error2.24269e+06/2.24269e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.07186 output => Distance from last mesh [mm] = 0 output => Number of bad orientation = 0 / 53 output => Contrast : 478.002 / 50 output => Distance of segmentation [mm] = 321.098 output => output => Propagation step 54/200 output => Propagation length [mm] : 321.098 / 800 output => Contrast = 369.324 output => Iteration Position = ( -30.1999, 81.2073, -606.668 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 190 iterations, 907 evaluations. Cost function reported error8484.3/2079.43 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.31207 output => Most promising points mean distance [mm] = -0.04 output => Most promising points absolute mean distance [mm] = 0.297778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 3 iterations, 16 evaluations. Cost function reported error1.13032e+06/1.1288e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.42928 output => Distance from last mesh [mm] = 0.27832 output => Number of bad orientation = 0 / 54 output => Contrast : 439.236 / 50 output => Distance of segmentation [mm] = 326.974 output => output => Propagation step 55/200 output => Propagation length [mm] : 326.974 / 800 output => Contrast = 335.767 output => Iteration Position = ( -30.2117, 84.6812, -610.726 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 93 iterations, 371 evaluations. Cost function reported error6727.18/2683.21 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.20778 output => Most promising points mean distance [mm] = -0.0288889 output => Most promising points absolute mean distance [mm] = 0.437778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 1 iterations, 9 evaluations. Cost function reported error2.673e+06/2.67237e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.30917 output => Distance from last mesh [mm] = 0.128985 output => Number of bad orientation = 0 / 55 output => Contrast : 376.668 / 50 output => Distance of segmentation [mm] = 332.609 output => output => Propagation step 56/200 output => Propagation length [mm] : 332.609 / 800 output => Contrast = 301.633 output => Iteration Position = ( -30.0665, 86.5673, -615.547 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 79 iterations, 728 evaluations. Cost function reported error7181.15/5140.61 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.434131 output => Most promising points mean distance [mm] = -0.0688889 output => Most promising points absolute mean distance [mm] = 0.495556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 145 iterations, 1623 evaluations. Cost function reported error209159/208379 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.817776 output => Distance from last mesh [mm] = 0.463507 output => Most promising points mean distance [mm] = 0.00666667 output => Most promising points absolute mean distance [mm] = 0.455556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 10 iterations, 105 evaluations. Cost function reported error299228/299209 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.834762 output => Distance from last mesh [mm] = 0.0256294 output => Number of bad orientation = 0 / 56 output => Contrast : 335.575 / 50 output => Distance of segmentation [mm] = 338.38 output => output => Propagation step 57/200 output => Propagation length [mm] : 338.38 / 800 output => Contrast = 256.036 output => Iteration Position = ( -29.7308, 87.9093, -620.851 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 248 iterations, 2754 evaluations. Cost function reported error4617.04/3739.14 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.436518 output => Most promising points mean distance [mm] = 0.168889 output => Most promising points absolute mean distance [mm] = 0.511111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 168 iterations, 1501 evaluations. Cost function reported error70117/69528.1 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.863481 output => Distance from last mesh [mm] = 0.497911 output => Most promising points mean distance [mm] = 0.155556 output => Most promising points absolute mean distance [mm] = 0.542222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 0 iterations, 53 evaluations. Cost function reported error4.00406e+06/4.00406e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.863481 output => Distance from last mesh [mm] = 0 output => Number of bad orientation = 0 / 57 output => Contrast : 297.812 / 50 output => Distance of segmentation [mm] = 343.805 output => output => Propagation step 58/200 output => Propagation length [mm] : 343.805 / 800 output => Contrast = 241.37 output => Iteration Position = ( -29.6797, 90.2237, -625.62 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 2 iterations, 58 evaluations. Cost function reported error1602.54/1519.24 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.044924 output => Number of bad orientation = 0 / 58 output => Contrast : 266.346 / 50 output => Distance of segmentation [mm] = 349.219 output => output => Propagation step 59/200 output => Propagation length [mm] : 349.219 / 800 output => Contrast = 245.277 output => Iteration Position = ( -29.1115, 92.4134, -630.478 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 216 iterations, 2525 evaluations. Cost function reported error41.0102/30.5603 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.0981828 output => Number of bad orientation = 0 / 59 output => Contrast : 247.561 / 50 output => Distance of segmentation [mm] = 354.568 output => output => Propagation step 60/200 output => Propagation length [mm] : 354.568 / 800 output => Contrast = 205.187 output => Iteration Position = ( -28.7718, 94.762, -635.203 ) output => Stop because out of image output => Stop because out of range: down output => Number of bad orientation = 0 / 60 output => Contrast : 230.612 / 50 output => Distance of segmentation [mm] = 354.568 output => output => output => Initial deformation : 90 points and 150 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 28 iterations, 83 evaluations. Cost function reported error62525.1/4100.16 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.33101 output => Most promising points mean distance [mm] = -0.0586667 output => Most promising points absolute mean distance [mm] = 0.168 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 11 iterations, 146 evaluations. Cost function reported error1.02921e+06/1.02756e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.53878 output => Distance from last mesh [mm] = 0.37815 output => Most promising points mean distance [mm] = -0.0626667 output => Most promising points absolute mean distance [mm] = 0.153333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 78 evaluations. Cost function reported error1.30914e+06/1.30886e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.5615 output => Distance from last mesh [mm] = 0.06357 output => Most promising points mean distance [mm] = -0.00133333 output => Most promising points absolute mean distance [mm] = 0.137333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 102 evaluations. Cost function reported error1.41412e+06/1.41405e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.56627 output => Distance from last mesh [mm] = 0.0349896 output => output => Propagation step 1/200 output => Propagation length [mm] : 7.82959 / 800 output => Contrast = 657.253 output => Iteration Position = ( -17.3121, 67.7862, -287.661 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 7 iterations, 92 evaluations. Cost function reported error1155.64/830.868 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.10567 output => Number of bad orientation = 0 / 1 output => Contrast : 638.168 / 50 output => Distance of segmentation [mm] = 13.6619 output => output => Propagation step 2/200 output => Propagation length [mm] : 13.6619 / 800 output => Contrast = 653.666 output => Iteration Position = ( -17.0475, 67.5027, -281.843 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 42 iterations, 361 evaluations. Cost function reported error2291.42/988.276 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.189263 output => Number of bad orientation = 0 / 2 output => Contrast : 654.093 / 50 output => Distance of segmentation [mm] = 19.4855 output => output => Propagation step 3/200 output => Propagation length [mm] : 19.4855 / 800 output => Contrast = 606.212 output => Iteration Position = ( -16.7885, 67.082, -276.048 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 340 iterations, 3820 evaluations. Cost function reported error3896.84/1524.56 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.260953 output => Number of bad orientation = 0 / 3 output => Contrast : 639.044 / 50 output => Distance of segmentation [mm] = 25.3431 output => output => Propagation step 4/200 output => Propagation length [mm] : 25.3431 / 800 output => Contrast = 559.014 output => Iteration Position = ( -16.535, 66.6735, -270.221 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 101 iterations, 1141 evaluations. Cost function reported error3743.76/1435.27 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.291185 output => Number of bad orientation = 0 / 4 output => Contrast : 606.297 / 50 output => Distance of segmentation [mm] = 31.1625 output => output => Propagation step 5/200 output => Propagation length [mm] : 31.1625 / 800 output => Contrast = 606.02 output => Iteration Position = ( -16.2933, 66.2574, -264.433 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 18 iterations, 158 evaluations. Cost function reported error1699.16/846.556 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.160222 output => Number of bad orientation = 0 / 5 output => Contrast : 590.415 / 50 output => Distance of segmentation [mm] = 36.9778 output => output => Propagation step 6/200 output => Propagation length [mm] : 36.9778 / 800 output => Contrast = 573.231 output => Iteration Position = ( -16.0128, 65.6164, -258.674 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 263 iterations, 3086 evaluations. Cost function reported error2047.28/1052.28 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.182492 output => Number of bad orientation = 0 / 6 output => Contrast : 579.421 / 50 output => Distance of segmentation [mm] = 42.8011 output => output => Propagation step 7/200 output => Propagation length [mm] : 42.8011 / 800 output => Contrast = 555.235 output => Iteration Position = ( -15.7056, 64.9377, -252.912 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 29 iterations, 254 evaluations. Cost function reported error3171.05/1700.27 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.228376 output => Number of bad orientation = 0 / 7 output => Contrast : 578.162 / 50 output => Distance of segmentation [mm] = 48.6248 output => output => Propagation step 8/200 output => Propagation length [mm] : 48.6248 / 800 output => Contrast = 536.407 output => Iteration Position = ( -15.4884, 64.2887, -247.141 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 114 iterations, 951 evaluations. Cost function reported error4424.67/1547.97 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.334043 output => Number of bad orientation = 0 / 8 output => Contrast : 554.958 / 50 output => Distance of segmentation [mm] = 54.4443 output => output => Propagation step 9/200 output => Propagation length [mm] : 54.4443 / 800 output => Contrast = 609.478 output => Iteration Position = ( -15.1598, 63.4414, -241.42 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 99 iterations, 321 evaluations. Cost function reported error4262.69/1031.55 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.49844 output => Most promising points mean distance [mm] = -0.0244444 output => Most promising points absolute mean distance [mm] = 0.153333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 3 iterations, 16 evaluations. Cost function reported error444488/443982 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.516428 output => Distance from last mesh [mm] = 0.133869 output => Number of bad orientation = 0 / 9 output => Contrast : 567.04 / 50 output => Distance of segmentation [mm] = 60.2837 output => output => Propagation step 10/200 output => Propagation length [mm] : 60.2837 / 800 output => Contrast = 582.261 output => Iteration Position = ( -14.6823, 62.6352, -235.712 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 29 iterations, 68 evaluations. Cost function reported error4437.94/1337.94 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.453307 output => Most promising points mean distance [mm] = -0.00444444 output => Most promising points absolute mean distance [mm] = 0.124444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 94 iterations, 1151 evaluations. Cost function reported error498159/498083 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.453763 output => Distance from last mesh [mm] = 0.0676169 output => Number of bad orientation = 0 / 10 output => Contrast : 576.049 / 50 output => Distance of segmentation [mm] = 66.1026 output => output => Propagation step 11/200 output => Propagation length [mm] : 66.1026 / 800 output => Contrast = 546.59 output => Iteration Position = ( -14.3519, 61.3103, -230.075 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 100 iterations, 919 evaluations. Cost function reported error3868.54/1644.01 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.277053 output => Number of bad orientation = 0 / 11 output => Contrast : 579.443 / 50 output => Distance of segmentation [mm] = 71.8771 output => output => Propagation step 12/200 output => Propagation length [mm] : 71.8771 / 800 output => Contrast = 559.078 output => Iteration Position = ( -14.4405, 60.2956, -224.404 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 64 iterations, 369 evaluations. Cost function reported error7415.31/1556.92 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.708111 output => Most promising points mean distance [mm] = 0.04 output => Most promising points absolute mean distance [mm] = 0.137778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 121 iterations, 1266 evaluations. Cost function reported error478759/477734 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.886374 output => Distance from last mesh [mm] = 0.548803 output => Most promising points mean distance [mm] = 0.0311111 output => Most promising points absolute mean distance [mm] = 0.168889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 69 evaluations. Cost function reported error2.24837e+06/2.2475e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.891773 output => Distance from last mesh [mm] = 0.435873 output => Most promising points mean distance [mm] = 0.0466667 output => Most promising points absolute mean distance [mm] = 0.144444 output => Number of bad orientation = 0 / 12 output => Contrast : 562.643 / 50 output => Distance of segmentation [mm] = 77.7528 output => output => Propagation step 13/200 output => Propagation length [mm] : 77.7528 / 800 output => Contrast = 559.014 output => Iteration Position = ( -13.5605, 59.1884, -218.801 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 158 iterations, 1686 evaluations. Cost function reported error2499.62/1127.53 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.219298 output => Number of bad orientation = 0 / 13 output => Contrast : 554.894 / 50 output => Distance of segmentation [mm] = 83.5421 output => output => Propagation step 14/200 output => Propagation length [mm] : 83.5421 / 800 output => Contrast = 558.373 output => Iteration Position = ( -14.0246, 57.7357, -213.227 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 244 iterations, 2840 evaluations. Cost function reported error2003.28/1025.96 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.226491 output => Number of bad orientation = 0 / 14 output => Contrast : 558.822 / 50 output => Distance of segmentation [mm] = 89.3352 output => output => Propagation step 15/200 output => Propagation length [mm] : 89.3352 / 800 output => Contrast = 493.5 output => Iteration Position = ( -13.6522, 56.1956, -207.682 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 288 iterations, 2253 evaluations. Cost function reported error4357.74/1278.66 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.498568 output => Most promising points mean distance [mm] = 0.0377778 output => Most promising points absolute mean distance [mm] = 0.122222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 11 iterations, 100 evaluations. Cost function reported error48954.8/48697.3 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.549941 output => Distance from last mesh [mm] = 0.125654 output => Number of bad orientation = 0 / 15 output => Contrast : 536.962 / 50 output => Distance of segmentation [mm] = 95.1234 output => output => Propagation step 16/200 output => Propagation length [mm] : 95.1234 / 800 output => Contrast = 479.155 output => Iteration Position = ( -13.294, 54.4023, -202.246 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 46 iterations, 261 evaluations. Cost function reported error4841.91/1798.74 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.388347 output => Number of bad orientation = 0 / 16 output => Contrast : 510.343 / 50 output => Distance of segmentation [mm] = 100.841 output => output => Propagation step 17/200 output => Propagation length [mm] : 100.841 / 800 output => Contrast = 466.411 output => Iteration Position = ( -13.1192, 53.2014, -196.679 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 43 iterations, 217 evaluations. Cost function reported error6645.16/2131.44 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.439629 output => Most promising points mean distance [mm] = -0.0288889 output => Most promising points absolute mean distance [mm] = 0.184444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 1 iterations, 9 evaluations. Cost function reported error128870/128628 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.472394 output => Distance from last mesh [mm] = 0.0582377 output => Number of bad orientation = 0 / 17 output => Contrast : 479.688 / 50 output => Distance of segmentation [mm] = 106.565 output => output => Propagation step 18/200 output => Propagation length [mm] : 106.565 / 800 output => Contrast = 482.549 output => Iteration Position = ( -13.0527, 51.5162, -191.243 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 14 iterations, 46 evaluations. Cost function reported error14976.8/2087.77 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.943637 output => Most promising points mean distance [mm] = -0.00666667 output => Most promising points absolute mean distance [mm] = 0.188889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 1 iterations, 8 evaluations. Cost function reported error628343/627825 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.01197 output => Distance from last mesh [mm] = 0.0928186 output => Number of bad orientation = 0 / 18 output => Contrast : 476.038 / 50 output => Distance of segmentation [mm] = 112.243 output => output => Propagation step 19/200 output => Propagation length [mm] : 112.243 / 800 output => Contrast = 468.14 output => Iteration Position = ( -13.0856, 49.4009, -186.022 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 40 iterations, 160 evaluations. Cost function reported error17346/2928.02 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.14173 output => Most promising points mean distance [mm] = 0.0555556 output => Most promising points absolute mean distance [mm] = 0.242222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 8 iterations, 85 evaluations. Cost function reported error2.14071e+06/2.13324e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.505 output => Distance from last mesh [mm] = 0.639486 output => Most promising points mean distance [mm] = 0.00888889 output => Most promising points absolute mean distance [mm] = 0.16 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 11 iterations, 114 evaluations. Cost function reported error7.90427e+06/7.90421e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.50633 output => Distance from last mesh [mm] = 0.0306049 output => Number of bad orientation = 0 / 19 output => Contrast : 472.366 / 50 output => Distance of segmentation [mm] = 118.339 output => output => Propagation step 20/200 output => Propagation length [mm] : 118.339 / 800 output => Contrast = 466.346 output => Iteration Position = ( -13.454, 47.5267, -180.303 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 81 iterations, 418 evaluations. Cost function reported error13668.4/3118.3 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.88937 output => Most promising points mean distance [mm] = 0.0511111 output => Most promising points absolute mean distance [mm] = 0.215556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 2 iterations, 12 evaluations. Cost function reported error369721/369005 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.957383 output => Distance from last mesh [mm] = 0.133975 output => Number of bad orientation = 0 / 20 output => Contrast : 472.345 / 50 output => Distance of segmentation [mm] = 123.707 output => output => Propagation step 21/200 output => Propagation length [mm] : 123.707 / 800 output => Contrast = 488.313 output => Iteration Position = ( -12.5399, 46.4887, -175.146 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 189 iterations, 2040 evaluations. Cost function reported error29440.7/3562.18 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.43775 output => Most promising points mean distance [mm] = 0.00666667 output => Most promising points absolute mean distance [mm] = 0.215556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 20 evaluations. Cost function reported error1.13612e+06/1.13458e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.65872 output => Distance from last mesh [mm] = 0.378631 output => Number of bad orientation = 0 / 21 output => Contrast : 474.266 / 50 output => Distance of segmentation [mm] = 129.267 output => output => Propagation step 22/200 output => Propagation length [mm] : 129.267 / 800 output => Contrast = 484.406 output => Iteration Position = ( -12.9804, 44.5619, -170.083 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 71 iterations, 696 evaluations. Cost function reported error29078.6/4567.67 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.42049 output => Most promising points mean distance [mm] = 0.0311111 output => Most promising points absolute mean distance [mm] = 0.253333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 206 iterations, 2375 evaluations. Cost function reported error726841/725408 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.66352 output => Distance from last mesh [mm] = 0.493378 output => Most promising points mean distance [mm] = 0.0466667 output => Most promising points absolute mean distance [mm] = 0.22 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 0 iterations, 3 evaluations. Cost function reported error3.34593e+06/3.34593e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.66352 output => Distance from last mesh [mm] = 0 output => Number of bad orientation = 0 / 22 output => Contrast : 479.688 / 50 output => Distance of segmentation [mm] = 135.208 output => output => Propagation step 23/200 output => Propagation length [mm] : 135.208 / 800 output => Contrast = 548.255 output => Iteration Position = ( -11.9293, 42.6722, -164.602 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 39 iterations, 170 evaluations. Cost function reported error32442.3/3470.18 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.4252 output => Most promising points mean distance [mm] = 0.02 output => Most promising points absolute mean distance [mm] = 0.184444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 56 iterations, 545 evaluations. Cost function reported error734955/730856 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.62499 output => Distance from last mesh [mm] = 0.5331 output => Most promising points mean distance [mm] = -0.0111111 output => Most promising points absolute mean distance [mm] = 0.122222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 70 evaluations. Cost function reported error3.62717e+06/3.62644e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.63806 output => Distance from last mesh [mm] = 0.135629 output => Number of bad orientation = 0 / 23 output => Contrast : 506.991 / 50 output => Distance of segmentation [mm] = 140.55 output => output => Propagation step 24/200 output => Propagation length [mm] : 140.55 / 800 output => Contrast = 621.198 output => Iteration Position = ( -11.515, 41.0253, -159.61 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 87 iterations, 234 evaluations. Cost function reported error21126.3/4059.26 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.82584 output => Most promising points mean distance [mm] = 0.122222 output => Most promising points absolute mean distance [mm] = 0.331111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 165 iterations, 1844 evaluations. Cost function reported error796989/792628 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.29575 output => Distance from last mesh [mm] = 0.645744 output => Most promising points mean distance [mm] = 0.00888889 output => Most promising points absolute mean distance [mm] = 0.164444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 3 iterations, 62 evaluations. Cost function reported error2.40499e+06/2.40275e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.36829 output => Distance from last mesh [mm] = 0.207129 output => Number of bad orientation = 0 / 24 output => Contrast : 551.286 / 50 output => Distance of segmentation [mm] = 144.386 output => output => Propagation step 25/200 output => Propagation length [mm] : 144.386 / 800 output => Contrast = 667.691 output => Iteration Position = ( -11.0254, 40.2716, -156.191 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 89 iterations, 477 evaluations. Cost function reported error22297.5/5943.57 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.15522 output => Most promising points mean distance [mm] = 0.131111 output => Most promising points absolute mean distance [mm] = 0.357778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 5 iterations, 70 evaluations. Cost function reported error742789/740266 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.47892 output => Distance from last mesh [mm] = 0.44948 output => Most promising points mean distance [mm] = 0.177778 output => Most promising points absolute mean distance [mm] = 0.328889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 9 iterations, 172 evaluations. Cost function reported error2.4843e+06/2.48231e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.73671 output => Distance from last mesh [mm] = 0.444163 output => Most promising points mean distance [mm] = 0.115556 output => Most promising points absolute mean distance [mm] = 0.28 output => Number of bad orientation = 0 / 25 output => Contrast : 612.381 / 50 output => Distance of segmentation [mm] = 149.497 output => output => Propagation step 26/200 output => Propagation length [mm] : 149.497 / 800 output => Contrast = 653.923 output => Iteration Position = ( -10.2398, 38.942, -151.39 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 20 iterations, 59 evaluations. Cost function reported error31008.6/5939.62 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.45376 output => Most promising points mean distance [mm] = 0.0755556 output => Most promising points absolute mean distance [mm] = 0.257778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 93 iterations, 1271 evaluations. Cost function reported error754588/754030 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.53813 output => Distance from last mesh [mm] = 0.147164 output => Number of bad orientation = 0 / 26 output => Contrast : 647.604 / 50 output => Distance of segmentation [mm] = 155.288 output => output => Propagation step 27/200 output => Propagation length [mm] : 155.288 / 800 output => Contrast = 683.958 output => Iteration Position = ( -9.7686, 37.733, -145.813 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 31 iterations, 130 evaluations. Cost function reported error41106.5/6924.54 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.70673 output => Most promising points mean distance [mm] = 0.0911111 output => Most promising points absolute mean distance [mm] = 0.228889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 12 iterations, 125 evaluations. Cost function reported error610428/607933 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.99296 output => Distance from last mesh [mm] = 0.573191 output => Most promising points mean distance [mm] = 0.0422222 output => Most promising points absolute mean distance [mm] = 0.197778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 20 evaluations. Cost function reported error2.15292e+06/2.15173e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.06199 output => Distance from last mesh [mm] = 0.287728 output => Number of bad orientation = 0 / 27 output => Contrast : 668.524 / 50 output => Distance of segmentation [mm] = 160.936 output => output => Propagation step 28/200 output => Propagation length [mm] : 160.936 / 800 output => Contrast = 701.505 output => Iteration Position = ( -9.14909, 35.9099, -140.65 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 34 iterations, 90 evaluations. Cost function reported error16567.5/5719.26 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.22687 output => Most promising points mean distance [mm] = 0.0822222 output => Most promising points absolute mean distance [mm] = 0.26 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 389 iterations, 4542 evaluations. Cost function reported error168555/167175 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.54695 output => Distance from last mesh [mm] = 0.49444 output => Most promising points mean distance [mm] = 0.0777778 output => Most promising points absolute mean distance [mm] = 0.224444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 8 iterations, 90 evaluations. Cost function reported error353980/353807 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.57274 output => Distance from last mesh [mm] = 0.0738061 output => Number of bad orientation = 0 / 28 output => Contrast : 679.795 / 50 output => Distance of segmentation [mm] = 166.006 output => output => Propagation step 29/200 output => Propagation length [mm] : 166.006 / 800 output => Contrast = 686.904 output => Iteration Position = ( -8.12131, 35.5999, -135.773 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 362 iterations, 4323 evaluations. Cost function reported error18441/5569.18 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.42929 output => Most promising points mean distance [mm] = 0.124444 output => Most promising points absolute mean distance [mm] = 0.271111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 6 iterations, 112 evaluations. Cost function reported error329518/329154 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.46166 output => Distance from last mesh [mm] = 0.0953907 output => Number of bad orientation = 0 / 29 output => Contrast : 690.789 / 50 output => Distance of segmentation [mm] = 171.953 output => output => Propagation step 30/200 output => Propagation length [mm] : 171.953 / 800 output => Contrast = 623.567 output => Iteration Position = ( -7.81567, 34.2769, -130.051 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 226 iterations, 519 evaluations. Cost function reported error11536.3/4799.75 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.22303 output => Most promising points mean distance [mm] = 0.155556 output => Most promising points absolute mean distance [mm] = 0.364444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 7 iterations, 80 evaluations. Cost function reported error236776/235270 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.55226 output => Distance from last mesh [mm] = 0.569608 output => Most promising points mean distance [mm] = 0.1 output => Most promising points absolute mean distance [mm] = 0.348889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 7 iterations, 83 evaluations. Cost function reported error1.19293e+06/1.19228e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.58552 output => Distance from last mesh [mm] = 0.328644 output => Number of bad orientation = 0 / 30 output => Contrast : 670.659 / 50 output => Distance of segmentation [mm] = 177.448 output => output => Propagation step 31/200 output => Propagation length [mm] : 177.448 / 800 output => Contrast = 548.127 output => Iteration Position = ( -7.69297, 33.1163, -124.758 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 38 iterations, 240 evaluations. Cost function reported error10137.9/3334.82 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.895523 output => Most promising points mean distance [mm] = -0.0333333 output => Most promising points absolute mean distance [mm] = 0.282222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 94 iterations, 780 evaluations. Cost function reported error268668/267398 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.12129 output => Distance from last mesh [mm] = 0.458947 output => Most promising points mean distance [mm] = -0.0111111 output => Most promising points absolute mean distance [mm] = 0.255556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 17 evaluations. Cost function reported error929240/928829 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.20169 output => Distance from last mesh [mm] = 0.179303 output => Number of bad orientation = 0 / 31 output => Contrast : 619.533 / 50 output => Distance of segmentation [mm] = 182.338 output => output => Propagation step 32/200 output => Propagation length [mm] : 182.338 / 800 output => Contrast = 400.192 output => Iteration Position = ( -8.10725, 32.4129, -120.074 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 108 iterations, 924 evaluations. Cost function reported error14367.7/4333.44 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.04081 output => Most promising points mean distance [mm] = -0.122222 output => Most promising points absolute mean distance [mm] = 0.331111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 70 evaluations. Cost function reported error854451/852038 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.24952 output => Distance from last mesh [mm] = 0.346362 output => Number of bad orientation = 0 / 32 output => Contrast : 523.962 / 50 output => Distance of segmentation [mm] = 188.111 output => output => Propagation step 33/200 output => Propagation length [mm] : 188.111 / 800 output => Contrast = 429.715 output => Iteration Position = ( -6.99914, 31.9837, -114.48 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 84 iterations, 510 evaluations. Cost function reported error13389.2/5672.28 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.866426 output => Most promising points mean distance [mm] = 0.146667 output => Most promising points absolute mean distance [mm] = 0.355556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 41 iterations, 112 evaluations. Cost function reported error584526/581587 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.79424 output => Distance from last mesh [mm] = 1.3048 output => Most promising points mean distance [mm] = 0.117778 output => Most promising points absolute mean distance [mm] = 0.371111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 74 iterations, 869 evaluations. Cost function reported error3.64698e+06/3.64144e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.25118 output => Distance from last mesh [mm] = 0.742082 output => Most promising points mean distance [mm] = 0.0933333 output => Most promising points absolute mean distance [mm] = 0.32 output => Number of bad orientation = 0 / 33 output => Contrast : 459.345 / 50 output => Distance of segmentation [mm] = 194.157 output => output => Propagation step 34/200 output => Propagation length [mm] : 194.157 / 800 output => Contrast = 436.375 output => Iteration Position = ( -6.08788, 30.8002, -108.803 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 12 iterations, 90 evaluations. Cost function reported error13538/4221.14 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.932764 output => Most promising points mean distance [mm] = 0.0577778 output => Most promising points absolute mean distance [mm] = 0.311111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 114 iterations, 1202 evaluations. Cost function reported error462986/460320 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.31108 output => Distance from last mesh [mm] = 0.571708 output => Most promising points mean distance [mm] = 0.0111111 output => Most promising points absolute mean distance [mm] = 0.308889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 18 evaluations. Cost function reported error1.0612e+06/1.05773e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.65058 output => Distance from last mesh [mm] = 0.478115 output => Most promising points mean distance [mm] = 0.0377778 output => Most promising points absolute mean distance [mm] = 0.242222 output => Number of bad orientation = 0 / 34 output => Contrast : 422.094 / 50 output => Distance of segmentation [mm] = 199.544 output => output => Propagation step 35/200 output => Propagation length [mm] : 199.544 / 800 output => Contrast = 523.279 output => Iteration Position = ( -6.11551, 30.1715, -103.47 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 179 iterations, 870 evaluations. Cost function reported error6744.93/3538.2 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.685321 output => Most promising points mean distance [mm] = -0.166667 output => Most promising points absolute mean distance [mm] = 0.406667 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 6 iterations, 77 evaluations. Cost function reported error214023/212669 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.883765 output => Distance from last mesh [mm] = 0.300434 output => Number of bad orientation = 0 / 35 output => Contrast : 463.123 / 50 output => Distance of segmentation [mm] = 205.178 output => output => Propagation step 36/200 output => Propagation length [mm] : 205.178 / 800 output => Contrast = 504.899 output => Iteration Position = ( -4.98131, 29.3445, -98.1016 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 262 iterations, 1594 evaluations. Cost function reported error11035.8/4898.5 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.994002 output => Most promising points mean distance [mm] = 0.0333333 output => Most promising points absolute mean distance [mm] = 0.313333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 55 iterations, 340 evaluations. Cost function reported error492509/489941 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.54661 output => Distance from last mesh [mm] = 0.878631 output => Most promising points mean distance [mm] = 0.0777778 output => Most promising points absolute mean distance [mm] = 0.331111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 10 iterations, 116 evaluations. Cost function reported error1.84453e+06/1.84147e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.81268 output => Distance from last mesh [mm] = 0.468801 output => Most promising points mean distance [mm] = 0.0444444 output => Most promising points absolute mean distance [mm] = 0.271111 output => Number of bad orientation = 0 / 36 output => Contrast : 488.184 / 50 output => Distance of segmentation [mm] = 211.03 output => output => Propagation step 37/200 output => Propagation length [mm] : 211.03 / 800 output => Contrast = 354.147 output => Iteration Position = ( -3.97261, 28.3602, -92.6494 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 74 iterations, 476 evaluations. Cost function reported error9272.55/3872.05 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.928782 output => Most promising points mean distance [mm] = 0.0866667 output => Most promising points absolute mean distance [mm] = 0.353333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 101 iterations, 831 evaluations. Cost function reported error351149/349083 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.50842 output => Distance from last mesh [mm] = 0.7168 output => Most promising points mean distance [mm] = 0.0177778 output => Most promising points absolute mean distance [mm] = 0.293333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 7 iterations, 81 evaluations. Cost function reported error1.02588e+06/1.02348e+06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.9991 output => Distance from last mesh [mm] = 0.740188 output => Most promising points mean distance [mm] = 0.0688889 output => Most promising points absolute mean distance [mm] = 0.291111 output => Number of bad orientation = 0 / 37 output => Contrast : 460.775 / 50 output => Distance of segmentation [mm] = 216.617 output => output => Propagation step 38/200 output => Propagation length [mm] : 216.617 / 800 output => Contrast = 407.301 output => Iteration Position = ( -3.55797, 27.4701, -87.4948 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 447 iterations, 4833 evaluations. Cost function reported error7335.5/4785.85 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.647764 output => Most promising points mean distance [mm] = -0.0111111 output => Most promising points absolute mean distance [mm] = 0.451111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 406 iterations, 4762 evaluations. Cost function reported error27919.9/27117.3 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.806818 output => Distance from last mesh [mm] = 0.308449 output => Number of bad orientation = 0 / 38 output => Contrast : 422.115 / 50 output => Distance of segmentation [mm] = 222.181 output => output => Propagation step 39/200 output => Propagation length [mm] : 222.181 / 800 output => Contrast = 419.084 output => Iteration Position = ( -3.63636, 27.3608, -82.0747 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 274 iterations, 1111 evaluations. Cost function reported error14121.7/5720.56 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.74405 output => Most promising points mean distance [mm] = -0.00444444 output => Most promising points absolute mean distance [mm] = 0.533333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 65 iterations, 358 evaluations. Cost function reported error186022/183995 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.03394 output => Distance from last mesh [mm] = 0.619942 output => Most promising points mean distance [mm] = 0.157778 output => Most promising points absolute mean distance [mm] = 0.46 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 179 iterations, 1875 evaluations. Cost function reported error352806/352593 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.07761 output => Distance from last mesh [mm] = 0.105023 output => Number of bad orientation = 0 / 39 output => Contrast : 393.51 / 50 output => Distance of segmentation [mm] = 229.202 output => output => Propagation step 40/200 output => Propagation length [mm] : 229.202 / 800 output => Contrast = 445.853 output => Iteration Position = ( -2.31722, 25.6581, -75.757 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 167 iterations, 1613 evaluations. Cost function reported error8980.29/5549.05 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.750877 output => Most promising points mean distance [mm] = 0.0333333 output => Most promising points absolute mean distance [mm] = 0.446667 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 53 iterations, 189 evaluations. Cost function reported error12973.9/11664.1 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.21744 output => Distance from last mesh [mm] = 0.576327 output => Most promising points mean distance [mm] = -0.0111111 output => Most promising points absolute mean distance [mm] = 0.308889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 35 iterations, 323 evaluations. Cost function reported error125614/124173 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.61916 output => Distance from last mesh [mm] = 0.509685 output => Most promising points mean distance [mm] = 0.0822222 output => Most promising points absolute mean distance [mm] = 0.304444 output => Number of bad orientation = 0 / 40 output => Contrast : 424.079 / 50 output => Distance of segmentation [mm] = 234.852 output => output => Propagation step 41/200 output => Propagation length [mm] : 234.852 / 800 output => Contrast = 472.238 output => Iteration Position = ( -2.04973, 25.5906, -70.8466 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 45 iterations, 312 evaluations. Cost function reported error14784.5/8963.82 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.742141 output => Most promising points mean distance [mm] = 0.0333333 output => Most promising points absolute mean distance [mm] = 0.535556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 405 iterations, 4954 evaluations. Cost function reported error55707.1/54177.2 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.970438 output => Distance from last mesh [mm] = 0.46537 output => Most promising points mean distance [mm] = 0.104444 output => Most promising points absolute mean distance [mm] = 0.544444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 311 iterations, 3899 evaluations. Cost function reported error18100.1/17799.6 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.09086 output => Distance from last mesh [mm] = 0.19053 output => Number of bad orientation = 0 / 41 output => Contrast : 445.725 / 50 output => Distance of segmentation [mm] = 240.481 output => output => Propagation step 42/200 output => Propagation length [mm] : 240.481 / 800 output => Contrast = 466.603 output => Iteration Position = ( -2.02662, 26.1611, -65.4466 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 84 iterations, 552 evaluations. Cost function reported error25278.5/9375.44 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.36464 output => Most promising points mean distance [mm] = 0.108889 output => Most promising points absolute mean distance [mm] = 0.468889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 170 iterations, 2056 evaluations. Cost function reported error407447/404153 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.74625 output => Distance from last mesh [mm] = 0.65506 output => Most promising points mean distance [mm] = -0.0466667 output => Most promising points absolute mean distance [mm] = 0.424444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 7 iterations, 80 evaluations. Cost function reported error563828/562419 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.94903 output => Distance from last mesh [mm] = 0.362109 output => Number of bad orientation = 0 / 42 output => Contrast : 461.565 / 50 output => Distance of segmentation [mm] = 246.549 output => output => Propagation step 43/200 output => Propagation length [mm] : 246.549 / 800 output => Contrast = 564.906 output => Iteration Position = ( -1.02845, 24.6486, -60.0706 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 163 iterations, 364 evaluations. Cost function reported error17671.8/5780.77 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.40464 output => Most promising points mean distance [mm] = 0.368889 output => Most promising points absolute mean distance [mm] = 0.448889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 112 iterations, 1024 evaluations. Cost function reported error55896/54898.1 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.52762 output => Distance from last mesh [mm] = 0.248118 output => Number of bad orientation = 0 / 43 output => Contrast : 501.249 / 50 output => Distance of segmentation [mm] = 251.99 output => output => Propagation step 44/200 output => Propagation length [mm] : 251.99 / 800 output => Contrast = 600.256 output => Iteration Position = ( -1.30557, 25.4984, -55.4393 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 204 iterations, 849 evaluations. Cost function reported error20266.9/5037.78 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.978961 output => Most promising points mean distance [mm] = 0.202222 output => Most promising points absolute mean distance [mm] = 0.304444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 61 iterations, 456 evaluations. Cost function reported error16014.7/15611.8 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.12846 output => Distance from last mesh [mm] = 0.234427 output => Number of bad orientation = 0 / 44 output => Contrast : 543.921 / 50 output => Distance of segmentation [mm] = 257.634 output => output => Propagation step 45/200 output => Propagation length [mm] : 257.634 / 800 output => Contrast = 656.356 output => Iteration Position = ( -1.51047, 25.6487, -50.8128 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 186 iterations, 1482 evaluations. Cost function reported error60990/10690.3 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.65007 output => Most promising points mean distance [mm] = 0.131111 output => Most promising points absolute mean distance [mm] = 0.282222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 31 iterations, 165 evaluations. Cost function reported error230874/225729 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.18933 output => Distance from last mesh [mm] = 1.26265 output => Most promising points mean distance [mm] = 0.12 output => Most promising points absolute mean distance [mm] = 0.248889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 299 iterations, 2923 evaluations. Cost function reported error419668/418003 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.59971 output => Distance from last mesh [mm] = 0.840564 output => Most promising points mean distance [mm] = 0.0866667 output => Most promising points absolute mean distance [mm] = 0.202222 output => Number of bad orientation = 0 / 45 output => Contrast : 607.173 / 50 output => Distance of segmentation [mm] = 262.721 output => output => Propagation step 46/200 output => Propagation length [mm] : 262.721 / 800 output => Contrast = 744.092 output => Iteration Position = ( -0.736533, 26.396, -47.0171 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 126 iterations, 1271 evaluations. Cost function reported error67082.4/8784.6 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.92993 output => Most promising points mean distance [mm] = 0.18 output => Most promising points absolute mean distance [mm] = 0.331111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 310 iterations, 3086 evaluations. Cost function reported error168828/165993 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.19348 output => Distance from last mesh [mm] = 0.446329 output => Most promising points mean distance [mm] = 0.0711111 output => Most promising points absolute mean distance [mm] = 0.2 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 55 iterations, 608 evaluations. Cost function reported error228854/228569 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.30023 output => Distance from last mesh [mm] = 0.198677 output => Number of bad orientation = 0 / 46 output => Contrast : 666.901 / 50 output => Distance of segmentation [mm] = 267.062 output => output => Propagation step 47/200 output => Propagation length [mm] : 267.062 / 800 output => Contrast = 831.636 output => Iteration Position = ( -0.832027, 27.2597, -42.8542 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 186 iterations, 1966 evaluations. Cost function reported error50552.2/7323.06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.72298 output => Most promising points mean distance [mm] = 0.228889 output => Most promising points absolute mean distance [mm] = 0.313333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 35 iterations, 422 evaluations. Cost function reported error18290.1/17144.6 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.92504 output => Distance from last mesh [mm] = 0.272749 output => Number of bad orientation = 0 / 47 output => Contrast : 744.028 / 50 output => Distance of segmentation [mm] = 272.08 output => output => Propagation step 48/200 output => Propagation length [mm] : 272.08 / 800 output => Contrast = 821.966 output => Iteration Position = ( -0.614704, 27.0311, -38.0164 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 157 iterations, 1494 evaluations. Cost function reported error18630/7225.12 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.656989 output => Most promising points mean distance [mm] = 0.0822222 output => Most promising points absolute mean distance [mm] = 0.215556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 135 iterations, 1422 evaluations. Cost function reported error16718.7/14810.1 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.867737 output => Distance from last mesh [mm] = 0.474984 output => Most promising points mean distance [mm] = 0.122222 output => Most promising points absolute mean distance [mm] = 0.228889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 163 iterations, 1744 evaluations. Cost function reported error27191.7/26633.9 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.04436 output => Distance from last mesh [mm] = 0.300229 output => Number of bad orientation = 0 / 48 output => Contrast : 799.231 / 50 output => Distance of segmentation [mm] = 276.606 output => output => Propagation step 49/200 output => Propagation length [mm] : 276.606 / 800 output => Contrast = 801.281 output => Iteration Position = ( -0.633119, 28.4282, -33.7533 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 40 iterations, 111 evaluations. Cost function reported error23970/3809.42 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.69935 output => Most promising points mean distance [mm] = 0.117778 output => Most promising points absolute mean distance [mm] = 0.264444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 60 iterations, 143 evaluations. Cost function reported error28798.3/26843 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.97885 output => Distance from last mesh [mm] = 0.502667 output => Most promising points mean distance [mm] = 0.0577778 output => Most promising points absolute mean distance [mm] = 0.177778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 39 iterations, 166 evaluations. Cost function reported error62405.1/61297.5 . Final step size = 0 output => output => Distance from initial mesh [mm] = 2.30937 output => Distance from last mesh [mm] = 0.519638 output => Most promising points mean distance [mm] = 0.0822222 output => Most promising points absolute mean distance [mm] = 0.166667 output => Number of bad orientation = 0 / 49 output => Contrast : 818.294 / 50 output => Distance of segmentation [mm] = 281.52 output => output => Propagation step 50/200 output => Propagation length [mm] : 281.52 / 800 output => Contrast = 693.052 output => Iteration Position = ( -0.978908, 28.8966, -31.1367 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 35 iterations, 138 evaluations. Cost function reported error19736.5/7219.58 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.661078 output => Most promising points mean distance [mm] = -0.0177778 output => Most promising points absolute mean distance [mm] = 0.217778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 40 iterations, 217 evaluations. Cost function reported error10676.2/9073.12 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.22373 output => Distance from last mesh [mm] = 0.781862 output => Most promising points mean distance [mm] = 0.0111111 output => Most promising points absolute mean distance [mm] = 0.197778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 64 iterations, 283 evaluations. Cost function reported error16463/16134.6 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.51211 output => Distance from last mesh [mm] = 0.420044 output => Most promising points mean distance [mm] = 0.02 output => Most promising points absolute mean distance [mm] = 0.193333 output => Number of bad orientation = 0 / 50 output => Contrast : 772.099 / 50 output => Distance of segmentation [mm] = 285.769 output => output => Propagation step 51/200 output => Propagation length [mm] : 285.769 / 800 output => Contrast = 771.31 output => Iteration Position = ( -0.16899, 28.446, -27.7502 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 408 iterations, 4914 evaluations. Cost function reported error28172.7/9410.28 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.808119 output => Most promising points mean distance [mm] = -0.00888889 output => Most promising points absolute mean distance [mm] = 0.208889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 66 iterations, 656 evaluations. Cost function reported error14588.1/12257.7 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.822156 output => Distance from last mesh [mm] = 0.351968 output => Number of bad orientation = 0 / 51 output => Contrast : 755.214 / 50 output => Distance of segmentation [mm] = 290.076 output => output => Propagation step 52/200 output => Propagation length [mm] : 290.076 / 800 output => Contrast = 758.886 output => Iteration Position = ( -0.255299, 29.3513, -24.4828 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 139 iterations, 1559 evaluations. Cost function reported error13887/7152.09 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.505217 output => Most promising points mean distance [mm] = -0.02 output => Most promising points absolute mean distance [mm] = 0.131111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 182 iterations, 436 evaluations. Cost function reported error5999.43/3909.63 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.18957 output => Distance from last mesh [mm] = 0.939693 output => Most promising points mean distance [mm] = -0.0377778 output => Most promising points absolute mean distance [mm] = 0.122222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 98 iterations, 690 evaluations. Cost function reported error10893.8/10665.5 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.31224 output => Distance from last mesh [mm] = 0.181796 output => Number of bad orientation = 0 / 52 output => Contrast : 741.082 / 50 output => Distance of segmentation [mm] = 295.261 output => output => Propagation step 53/200 output => Propagation length [mm] : 295.261 / 800 output => Contrast = 739.161 output => Iteration Position = ( -0.472781, 29.7917, -21.2844 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 386 iterations, 3720 evaluations. Cost function reported error12289.6/6122.96 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.1091 output => Most promising points mean distance [mm] = 0.0866667 output => Most promising points absolute mean distance [mm] = 0.193333 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 500 iterations, 5415 evaluations. Cost function reported error13774.7/12680.8 . Final step size = 6.37177e-12 output => output => Distance from initial mesh [mm] = 1.13479 output => Distance from last mesh [mm] = 0.313488 output => Number of bad orientation = 0 / 53 output => Contrast : 756.452 / 50 output => Distance of segmentation [mm] = 300.132 output => output => Propagation step 54/200 output => Propagation length [mm] : 300.132 / 800 output => Contrast = 558.117 output => Iteration Position = ( 0.179434, 29.5447, -18.0469 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 358 iterations, 3249 evaluations. Cost function reported error19282.4/9382.05 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.2425 output => Most promising points mean distance [mm] = 0.168889 output => Most promising points absolute mean distance [mm] = 0.32 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 6 iterations, 69 evaluations. Cost function reported error23760.2/22666.5 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.41435 output => Distance from last mesh [mm] = 0.376853 output => Number of bad orientation = 0 / 54 output => Contrast : 685.388 / 50 output => Distance of segmentation [mm] = 304.619 output => output => Propagation step 55/200 output => Propagation length [mm] : 304.619 / 800 output => Contrast = 616.01 output => Iteration Position = ( -0.247265, 29.6067, -14.3087 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 98 iterations, 689 evaluations. Cost function reported error16285/4273.48 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.43826 output => Most promising points mean distance [mm] = 0.126667 output => Most promising points absolute mean distance [mm] = 0.242222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 12 iterations, 121 evaluations. Cost function reported error17016.5/15288.3 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.62659 output => Distance from last mesh [mm] = 0.47027 output => Most promising points mean distance [mm] = 0.0888889 output => Most promising points absolute mean distance [mm] = 0.231111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 304 iterations, 3430 evaluations. Cost function reported error23724.5/23651.8 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.65862 output => Distance from last mesh [mm] = 0.0956075 output => Number of bad orientation = 0 / 55 output => Contrast : 637.763 / 50 output => Distance of segmentation [mm] = 309.77 output => output => Propagation step 56/200 output => Propagation length [mm] : 309.77 / 800 output => Contrast = 600.897 output => Iteration Position = ( -0.536203, 28.9489, -12.0434 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 53 iterations, 177 evaluations. Cost function reported error21101.6/8652.33 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.887584 output => Most promising points mean distance [mm] = 0.0955556 output => Most promising points absolute mean distance [mm] = 0.331111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 9 iterations, 31 evaluations. Cost function reported error29169.3/27756.3 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.04674 output => Distance from last mesh [mm] = 0.406784 output => Most promising points mean distance [mm] = 0.0711111 output => Most promising points absolute mean distance [mm] = 0.288889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 20 iterations, 208 evaluations. Cost function reported error57127.8/56486.3 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.30281 output => Distance from last mesh [mm] = 0.517367 output => Most promising points mean distance [mm] = 0.0844444 output => Most promising points absolute mean distance [mm] = 0.275556 output => Number of bad orientation = 0 / 56 output => Contrast : 591.675 / 50 output => Distance of segmentation [mm] = 314.749 output => output => Propagation step 57/200 output => Propagation length [mm] : 314.749 / 800 output => Contrast = 544.156 output => Iteration Position = ( 0.0175276, 29.4153, -9.31309 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 209 iterations, 2423 evaluations. Cost function reported error21205.4/12305.7 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.673525 output => Most promising points mean distance [mm] = 0.0511111 output => Most promising points absolute mean distance [mm] = 0.388889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 83 iterations, 505 evaluations. Cost function reported error10329.8/7545.79 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.33182 output => Distance from last mesh [mm] = 0.926888 output => Most promising points mean distance [mm] = 0.108889 output => Most promising points absolute mean distance [mm] = 0.397778 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 20 iterations, 88 evaluations. Cost function reported error17103.4/16276.1 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.65405 output => Distance from last mesh [mm] = 0.38022 output => Number of bad orientation = 0 / 57 output => Contrast : 587.021 / 50 output => Distance of segmentation [mm] = 320.087 output => output => Propagation step 58/200 output => Propagation length [mm] : 320.087 / 800 output => Contrast = 513.737 output => Iteration Position = ( -0.673622, 29.1548, -6.44533 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 73 iterations, 948 evaluations. Cost function reported error8780.4/7045.81 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.340388 output => Number of bad orientation = 0 / 58 output => Contrast : 552.93 / 50 output => Distance of segmentation [mm] = 324.652 output => output => Propagation step 59/200 output => Propagation length [mm] : 324.652 / 800 output => Contrast = 481.076 output => Iteration Position = ( 0.00612513, 30.54, -3.12623 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 31 iterations, 191 evaluations. Cost function reported error8382.27/5229.49 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.39457 output => Number of bad orientation = 0 / 59 output => Contrast : 512.99 / 50 output => Distance of segmentation [mm] = 328.998 output => output => Propagation step 60/200 output => Propagation length [mm] : 328.998 / 800 output => Contrast = 456.484 output => Iteration Position = ( -0.0480763, 30.701, 0.595776 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 70 iterations, 559 evaluations. Cost function reported error5884.78/4526.27 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.751865 output => Most promising points mean distance [mm] = 0.186667 output => Most promising points absolute mean distance [mm] = 0.28 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 106 iterations, 971 evaluations. Cost function reported error3633.69/2541.5 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.997674 output => Distance from last mesh [mm] = 0.500281 output => Most promising points mean distance [mm] = 0.0911111 output => Most promising points absolute mean distance [mm] = 0.322222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 26 iterations, 215 evaluations. Cost function reported error5004.59/4881.67 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.10714 output => Distance from last mesh [mm] = 0.174345 output => Number of bad orientation = 0 / 60 output => Contrast : 483.766 / 50 output => Distance of segmentation [mm] = 333.988 output => output => Propagation step 61/200 output => Propagation length [mm] : 333.988 / 800 output => Contrast = 479.731 output => Iteration Position = ( 0.104809, 31.1466, 3.77513 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 28 iterations, 213 evaluations. Cost function reported error3975.19/2998.41 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.197893 output => Number of bad orientation = 0 / 61 output => Contrast : 472.43 / 50 output => Distance of segmentation [mm] = 339.398 output => output => Propagation step 62/200 output => Propagation length [mm] : 339.398 / 800 output => Contrast = 402.37 output => Iteration Position = ( 0.169683, 31.2488, 6.97534 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 28 iterations, 346 evaluations. Cost function reported error2463.32/2108.64 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.184818 output => Number of bad orientation = 0 / 62 output => Contrast : 446.195 / 50 output => Distance of segmentation [mm] = 344.996 output => output => Propagation step 63/200 output => Propagation length [mm] : 344.996 / 800 output => Contrast = 221.07 output => Iteration Position = ( 0.290656, 31.3644, 10.2295 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 199 iterations, 421 evaluations. Cost function reported error6434.47/2225.17 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.959417 output => Most promising points mean distance [mm] = 0.0911111 output => Most promising points absolute mean distance [mm] = 0.211111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 96 iterations, 207 evaluations. Cost function reported error19015.3/18384.2 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.40002 output => Distance from last mesh [mm] = 0.636014 output => Most promising points mean distance [mm] = 0.0933333 output => Most promising points absolute mean distance [mm] = 0.226667 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 336 iterations, 2645 evaluations. Cost function reported error37454.7/37141.1 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.69744 output => Distance from last mesh [mm] = 0.613858 output => Most promising points mean distance [mm] = 0.0422222 output => Most promising points absolute mean distance [mm] = 0.202222 output => Number of bad orientation = 0 / 63 output => Contrast : 367.723 / 50 output => Distance of segmentation [mm] = 351.004 output => output => Propagation step 64/200 output => Propagation length [mm] : 351.004 / 800 output => Contrast = 143.516 output => Iteration Position = ( 0.271122, 32.5598, 14.6952 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 224 iterations, 2742 evaluations. Cost function reported error5852.84/4879.23 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.260703 output => Number of bad orientation = 0 / 64 output => Contrast : 255.652 / 50 output => Distance of segmentation [mm] = 356.696 output => output => Propagation step 65/200 output => Propagation length [mm] : 356.696 / 800 output => Contrast = 207.429 output => Iteration Position = ( 0.461475, 32.5116, 19.295 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 36 iterations, 460 evaluations. Cost function reported error11290.2/6875.41 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.48899 output => Most promising points mean distance [mm] = 0.0266667 output => Most promising points absolute mean distance [mm] = 0.591111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 126 iterations, 812 evaluations. Cost function reported error13759.1/12535.6 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.83888 output => Distance from last mesh [mm] = 0.460865 output => Most promising points mean distance [mm] = 0.102222 output => Most promising points absolute mean distance [mm] = 0.515556 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 31 iterations, 162 evaluations. Cost function reported error16522.1/15491.5 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.917955 output => Distance from last mesh [mm] = 0.343221 output => Number of bad orientation = 0 / 65 output => Contrast : 190.671 / 50 output => Distance of segmentation [mm] = 361.593 output => output => Propagation step 66/200 output => Propagation length [mm] : 361.593 / 800 output => Contrast = 190.266 output => Iteration Position = ( 0.559673, 32.1644, 23.6322 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 72 iterations, 646 evaluations. Cost function reported error9812.37/6154.19 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.629701 output => Most promising points mean distance [mm] = 0.322222 output => Most promising points absolute mean distance [mm] = 0.828889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 322 iterations, 2002 evaluations. Cost function reported error12632.4/9089.92 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.64265 output => Distance from last mesh [mm] = 1.21277 output => Most promising points mean distance [mm] = 0.162222 output => Most promising points absolute mean distance [mm] = 0.588889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 27 iterations, 76 evaluations. Cost function reported error11875.3/10853.6 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.84454 output => Distance from last mesh [mm] = 0.493828 output => Most promising points mean distance [mm] = 0.12 output => Most promising points absolute mean distance [mm] = 0.573333 output => Number of bad orientation = 0 / 66 output => Contrast : 180.403 / 50 output => Distance of segmentation [mm] = 367.578 output => output => Propagation step 67/200 output => Propagation length [mm] : 367.578 / 800 output => Contrast = 262.44 output => Iteration Position = ( 0.826556, 32.1798, 28.1003 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 295 iterations, 3283 evaluations. Cost function reported error17201.1/9142.06 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.695793 output => Most promising points mean distance [mm] = 0.348889 output => Most promising points absolute mean distance [mm] = 0.762222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 73 iterations, 767 evaluations. Cost function reported error18528/17305.9 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.9177 output => Distance from last mesh [mm] = 0.381277 output => Number of bad orientation = 0 / 67 output => Contrast : 220.045 / 50 output => Distance of segmentation [mm] = 374.093 output => output => Propagation step 68/200 output => Propagation length [mm] : 374.093 / 800 output => Contrast = 351.073 output => Iteration Position = ( 0.824144, 32.4978, 33.461 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 184 iterations, 437 evaluations. Cost function reported error7544.15/3993.6 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.902285 output => Most promising points mean distance [mm] = -0.1 output => Most promising points absolute mean distance [mm] = 0.691111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 32 iterations, 253 evaluations. Cost function reported error68776.2/65029.2 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.16125 output => Distance from last mesh [mm] = 0.350316 output => Number of bad orientation = 0 / 68 output => Contrast : 267.926 / 50 output => Distance of segmentation [mm] = 379.2 output => output => Propagation step 69/200 output => Propagation length [mm] : 379.2 / 800 output => Contrast = 410.247 output => Iteration Position = ( 0.70263, 32.2189, 36.9271 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 323 iterations, 2601 evaluations. Cost function reported error6480.36/2135.28 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.896319 output => Most promising points mean distance [mm] = -0.311111 output => Most promising points absolute mean distance [mm] = 0.408889 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 231 iterations, 2648 evaluations. Cost function reported error130897/128243 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.2785 output => Distance from last mesh [mm] = 0.442278 output => Most promising points mean distance [mm] = -0.291111 output => Most promising points absolute mean distance [mm] = 0.384444 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 192 iterations, 2366 evaluations. Cost function reported error341901/340128 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.5073 output => Distance from last mesh [mm] = 0.245752 output => Number of bad orientation = 0 / 69 output => Contrast : 341.253 / 50 output => Distance of segmentation [mm] = 384.297 output => output => Propagation step 70/200 output => Propagation length [mm] : 384.297 / 800 output => Contrast = 365.674 output => Iteration Position = ( 0.28554, 32.1029, 38.994 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 125 iterations, 760 evaluations. Cost function reported error5550.7/2417.23 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.400132 output => Most promising points mean distance [mm] = -0.0688889 output => Most promising points absolute mean distance [mm] = 0.202222 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 105 iterations, 955 evaluations. Cost function reported error56294.7/56061.1 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.510974 output => Distance from last mesh [mm] = 0.178684 output => Number of bad orientation = 0 / 70 output => Contrast : 375.664 / 50 output => Distance of segmentation [mm] = 389.189 output => output => Propagation step 71/200 output => Propagation length [mm] : 389.189 / 800 output => Contrast = 414.025 output => Iteration Position = ( 0.364855, 32.0306, 40.5039 ) output => Mesh deformation : 60 points and 90 triangles output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 68 iterations, 212 evaluations. Cost function reported error5805.96/1226.77 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.735993 output => Most promising points mean distance [mm] = -0.113333 output => Most promising points absolute mean distance [mm] = 0.171111 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 141 iterations, 1156 evaluations. Cost function reported error164232/163386 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.07859 output => Distance from last mesh [mm] = 0.45935 output => Most promising points mean distance [mm] = -0.0711111 output => Most promising points absolute mean distance [mm] = 0.2 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 4 iterations, 69 evaluations. Cost function reported error360758/360669 . Final step size = 0 output => output => Distance from initial mesh [mm] = 1.11454 output => Distance from last mesh [mm] = 0.0472392 output => Stop by deformation error : overlap during propagation output => Number of bad orientation = 0 / 71 output => Contrast : 396.648 / 50 output => Distance of segmentation [mm] = 389.189 output => output => Global deformation after subdivision... 23730 points and 47400 triangles output => Most promising points mean distance [mm] = 0.223312 output => Most promising points absolute mean distance [mm] = 0.352536 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 2 iterations, 58 evaluations. Cost function reported error3.82936e+07/3.72801e+07 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.412709 output => Most promising points mean distance [mm] = 0.170899 output => Most promising points absolute mean distance [mm] = 0.262266 output => Report from vnl optimizer for deformation : output => vnl_conjugate_gradient: 8 iterations, 122 evaluations. Cost function reported error3.73155e+07/3.69549e+07 . Final step size = 0 output => output => Distance from initial mesh [mm] = 0.750722 output => Distance from last mesh [mm] = 0.357258 output => Distance of segmentation [mm] = 697.347 output => Total propagation length = 675.212 mm output => output => Segmentation finished. To view results, type: output => fslview /tmp/sct-20210606215726.828915-propseg-4o3z7wmx/stiched_spine_rescaled.nii.gz ./stiched_spine_rescaled_seg.nii.gz & mv ./stiched_spine_rescaled_seg.nii.gz ./stiched_spine_seg.nii.gz mv ./stiched_spine_rescaled_centerline.nii.gz ./stiched_spine_centerline.nii.gz Check consistency of segmentation... Creating temporary folder (/tmp/sct-20210606215927.493492-propseg-iugyak9i) Loaded ./stiched_spine_seg.nii.gz (/home/stefan/sdintegration/pythonPlugin/test/__main__.Test.test_verify/Output/analysisFolder/stiched_spine_seg.nii.gz) orientation ASL shape (271, 690, 61) Saving image to /tmp/sct-20210606215927.493492-propseg-iugyak9i/tmp.segmentation.nii.gz orientation ASL shape (271, 690, 61) Loaded ./stiched_spine_centerline.nii.gz (/home/stefan/sdintegration/pythonPlugin/test/__main__.Test.test_verify/Output/analysisFolder/stiched_spine_centerline.nii.gz) orientation ASL shape (271, 690, 61) Saving image to /tmp/sct-20210606215927.493492-propseg-iugyak9i/tmp.centerline.nii.gz orientation ASL shape (271, 690, 61) /tmp/sct-20210606215927.493492-propseg-iugyak9i/tmp.segmentation.nii.gz /tmp/sct-20210606215927.493492-propseg-iugyak9i/tmp.centerline.nii.gz Get data dimensions... /tmp/sct-20210606215927.493492-propseg-iugyak9i/tmp.segmentation_RPI_c.nii.gz rm -rf /tmp/sct-20210606215927.493492-propseg-iugyak9i Copy header input --> output(s) to make sure qform is the same. File /home/stefan/sdintegration/pythonPlugin/test/__main__.Test.test_verify/Output/analysisFolder/stiched_spine_seg.nii.gz already exists. Will overwrite it. File /home/stefan/sdintegration/pythonPlugin/test/__main__.Test.test_verify/Output/analysisFolder/stiched_spine_centerline.nii.gz already exists. Will overwrite it.