joshua@XPS-15-9560:~/repos/spinalcordtoolbox/sct_testing_data/mt$ sct_testing -- Spinal Cord Toolbox (git-master-74f068df9042e6cce8473e67f1a3fe60ddadac70) sct_testing -- Trying URL: https://github.com/sct-data/sct_testing_data/releases/download/r20210114/sct_testing_data-r20210114.zip Downloading: sct_testing_data-r20210114.zip Status: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 7.17M/7.17M [00:00<00:00, 30.7MB/s] Creating temporary folder (/tmp/sct-20210215134013.867393-2vqjo7w7) Unzip data to: /tmp/sct-20210215134013.867393-2vqjo7w7 Removing temporary folders... Done! Creating temporary folder (/tmp/sct-20210215134013.922213-m949dt8e) Will run through the following tests: - sequentially: sct_deepseg_gm sct_deepseg_lesion sct_deepseg_sc - in parallel with 8 jobs: sct_analyze_lesion sct_analyze_texture sct_apply_transfo sct_convert sct_compute_ernst_angle sct_compute_hausdorff_distance sct_compute_mtr sct_compute_mscc sct_compute_snr sct_concat_transfo sct_create_mask sct_crop_image sct_dice_coefficient sct_detect_pmj sct_dmri_compute_dti sct_dmri_concat_b0_and_dwi sct_dmri_concat_bvals sct_dmri_concat_bvecs sct_dmri_compute_bvalue sct_dmri_moco sct_dmri_separate_b0_and_dwi sct_dmri_transpose_bvecs sct_extract_metric sct_flatten_sagittal sct_fmri_compute_tsnr sct_fmri_moco sct_get_centerline sct_image sct_label_utils sct_label_vertebrae sct_maths sct_merge_images sct_process_segmentation sct_propseg sct_qc sct_register_multimodal sct_register_to_template sct_resample sct_smooth_spinalcord sct_straighten_spinalcord sct_warp_template Checking sct_deepseg_gm.............................[OK] Checking sct_deepseg_lesion.........................[OK] Checking sct_deepseg_sc.............................[OK] Checking sct_analyze_lesion.........................[OK] Checking sct_analyze_texture........................[OK] Checking sct_apply_transfo..........................[OK] Checking sct_convert................................[OK] Checking sct_compute_ernst_angle....................[OK] Checking sct_compute_hausdorff_distance.............[OK] Checking sct_compute_mtr............................[OK] Checking sct_compute_mscc...........................[OK] Checking sct_compute_snr............................[OK] Checking sct_concat_transfo.........................[OK] Checking sct_create_mask............................[OK] Checking sct_crop_image.............................[OK] Checking sct_dice_coefficient.......................[OK] Checking sct_detect_pmj.............................[OK] Checking sct_dmri_compute_dti.......................[OK] Checking sct_dmri_concat_b0_and_dwi.................[OK] Checking sct_dmri_concat_bvals......................[OK] Checking sct_dmri_concat_bvecs......................[OK] Checking sct_dmri_compute_bvalue....................[OK] Checking sct_dmri_moco..............................[OK] Checking sct_dmri_separate_b0_and_dwi...............[OK] Checking sct_dmri_transpose_bvecs...................[OK] Checking sct_extract_metric.........................[OK] Checking sct_flatten_sagittal.......................[OK] Checking sct_fmri_compute_tsnr......................[OK] Checking sct_fmri_moco..............................[OK] Checking sct_get_centerline.........................[OK] Checking sct_image..................................[OK] Checking sct_label_utils............................[OK] Checking sct_label_vertebrae........................[OK] Checking sct_maths..................................[OK] Checking sct_merge_images...........................[OK] Checking sct_process_segmentation...................[OK] Checking sct_propseg................................[OK] Checking sct_qc.....................................[OK] Checking sct_register_multimodal....................[OK] Checking sct_register_to_template...................[OK] Checking sct_resample...............................[OK] Checking sct_smooth_spinalcord......................[OK] Checking sct_straighten_spinalcord..................[OK] Checking sct_warp_template..........................[OK] status: [0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0] Finished! Elapsed time: 167s