[liuj19@lri-108526 Downloads]$ bash install_sct-7.1_linux.sh ******************************* * Welcome to SCT installation * ******************************* Checking OS type and version... Linux lri-108526 3.10.0-1062.12.1.el7.x86_64 #1 SMP Tue Feb 4 23:02:59 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux Checking requirements... OK! Source files not present. Downloading source files (@ 7.1) to /tmp/tmp.M20n7wTeT4/spinalcordtoolbox. Cloning into '/tmp/tmp.M20n7wTeT4/spinalcordtoolbox'... Note: checking out '70883e860d682629bba1730d5895c7ed1e621b61'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b new_branch_name SCT version ......... 7.1 Installation type ... package Operating system .... linux (unknown) Shell config ........ /home/liuj19/.bashrc Checking permissions on required file /home/liuj19/.bashrc: - File exists: True - File ownership: True - Read permissions: True - Write permissions: True SCT will be installed here: [/home/liuj19/sct_7.1] Do you agree? [y]es/[n]o: y Copying source files from /tmp/tmp.M20n7wTeT4/spinalcordtoolbox to /home/liuj19/sct_7.1 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Do you want to add the sct_* scripts to your PATH environment? [y]es/[n]o: y Downloading Miniforge... wget -nv -O /tmp/tmp.M20n7wTeT4/miniforge.sh https://github.com/conda-forge/miniforge/releases/download/24.11.2-1/Miniforge3-Linux-x86_64.sh 2025-10-08 21:02:23 URL:https://release-assets.githubusercontent.com/github-production-release-asset/221584272/81e205c2-1911-4a2d-8b46-066d460f73d6?sp=r&sv=2018-11-09&sr=b&spr=https&se=2025-10-09T01%3A40%3A02Z&rscd=attachment%3B+filename%3DMiniforge3-Linux-x86_64.sh&rsct=application%2Foctet-stream&skoid=96c2d410-5711-43a1-aedd-ab1947aa7ab0&sktid=398a6654-997b-47e9-b12b-9515b896b4de&skt=2025-10-09T00%3A39%3A49Z&ske=2025-10-09T01%3A40%3A02Z&sks=b&skv=2018-11-09&sig=NwlP1WoKROzDzNj%2BuPqayC%2FeCG%2BIb9PvDUfE4kNFfDg%3D&jwt=eyJ0eXAiOiJKV1QiLCJhbGciOiJIUzI1NiJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmVsZWFzZS1hc3NldHMuZ2l0aHVidXNlcmNvbnRlbnQuY29tIiwia2V5Ijoia2V5MSIsImV4cCI6MTc1OTk3MzU0MiwibmJmIjoxNzU5OTcxNzQyLCJwYXRoIjoicmVsZWFzZWFzc2V0cHJvZHVjdGlvbi5ibG9iLmNvcmUud2luZG93cy5uZXQifQ.iQbGxhdIVBn_aWgpF2uR6y1NnQaqHsAT2YrVXuoDfYE&response-content-disposition=attachment%3B%20filename%3DMiniforge3-Linux-x86_64.sh&response-content-type=application%2Foctet-stream [77972610/77972610] -> "/tmp/tmp.M20n7wTeT4/miniforge.sh" [1] Installing Miniforge... bash /tmp/tmp.M20n7wTeT4/miniforge.sh -p /home/liuj19/sct_7.1/python -b -f PREFIX=/home/liuj19/sct_7.1/python Unpacking payload ... Extracting _libgcc_mutex-0.1-conda_forge.tar.bz2 Extracting ca-certificates-2024.12.14-hbcca054_0.conda Extracting ld_impl_linux-64-2.43-h712a8e2_2.conda Extracting pybind11-abi-4-hd8ed1ab_3.tar.bz2 Extracting python_abi-3.12-5_cp312.conda Extracting tzdata-2024b-hc8b5060_0.conda Extracting libgomp-14.2.0-h77fa898_1.conda Extracting _openmp_mutex-4.5-2_gnu.tar.bz2 Extracting libgcc-14.2.0-h77fa898_1.conda Extracting c-ares-1.34.4-hb9d3cd8_0.conda Extracting libexpat-2.6.4-h5888daf_0.conda Extracting libgcc-ng-14.2.0-h69a702a_1.conda Extracting liblzma-5.6.3-hb9d3cd8_1.conda Extracting libstdcxx-14.2.0-hc0a3c3a_1.conda Extracting libzlib-1.3.1-hb9d3cd8_2.conda Extracting openssl-3.4.0-hb9d3cd8_0.conda Extracting reproc-14.2.5.post0-hb9d3cd8_0.conda Extracting bzip2-1.0.8-h4bc722e_7.conda Extracting keyutils-1.6.1-h166bdaf_0.tar.bz2 Extracting libev-4.33-hd590300_2.conda Extracting libffi-3.4.2-h7f98852_5.tar.bz2 Extracting libiconv-1.17-hd590300_2.conda Extracting libnsl-2.0.1-hd590300_0.conda Extracting libsqlite-3.47.2-hee588c1_0.conda Extracting libssh2-1.11.1-hf672d98_0.conda Extracting libstdcxx-ng-14.2.0-h4852527_1.conda Extracting libuuid-2.38.1-h0b41bf4_0.conda Extracting libxcrypt-4.4.36-hd590300_1.conda Extracting lz4-c-1.10.0-h5888daf_1.conda Extracting lzo-2.10-hd590300_1001.conda Extracting ncurses-6.5-he02047a_1.conda Extracting reproc-cpp-14.2.5.post0-h5888daf_0.conda Extracting tk-8.6.13-noxft_h4845f30_101.conda Extracting fmt-11.0.2-h434a139_0.conda Extracting libedit-3.1.20191231-he28a2e2_2.tar.bz2 Extracting libnghttp2-1.64.0-h161d5f1_0.conda Extracting libsolv-0.7.30-h3509ff9_0.conda Extracting libxml2-2.13.5-h0d44e9d_1.conda Extracting readline-8.2-h8228510_1.conda Extracting yaml-cpp-0.8.0-h59595ed_0.conda Extracting zstd-1.5.6-ha6fb4c9_0.conda Extracting krb5-1.21.3-h659f571_0.conda Extracting libarchive-3.7.7-h4585015_3.conda Extracting python-3.12.8-h9e4cc4f_1_cpython.conda Extracting libcurl-8.11.1-h332b0f4_0.conda Extracting menuinst-2.2.0-py312h7900ff3_0.conda Extracting archspec-0.2.3-pyhd8ed1ab_0.conda Extracting boltons-24.0.0-pyhd8ed1ab_1.conda Extracting brotli-python-1.1.0-py312h2ec8cdc_2.conda Extracting certifi-2024.12.14-pyhd8ed1ab_0.conda Extracting charset-normalizer-3.4.1-pyhd8ed1ab_0.conda Extracting colorama-0.4.6-pyhd8ed1ab_1.conda Extracting distro-1.9.0-pyhd8ed1ab_1.conda Extracting frozendict-2.4.6-py312h66e93f0_0.conda Extracting hpack-4.0.0-pyhd8ed1ab_1.conda Extracting hyperframe-6.0.1-pyhd8ed1ab_1.conda Extracting idna-3.10-pyhd8ed1ab_1.conda Extracting jsonpointer-3.0.0-py312h7900ff3_1.conda Extracting libmamba-1.5.12-h49b8a8d_0.conda Extracting packaging-24.2-pyhd8ed1ab_2.conda Extracting platformdirs-4.3.6-pyhd8ed1ab_1.conda Extracting pluggy-1.5.0-pyhd8ed1ab_1.conda Extracting pycosat-0.6.6-py312h66e93f0_2.conda Extracting pycparser-2.22-pyh29332c3_1.conda Extracting pysocks-1.7.1-pyha55dd90_7.conda Extracting ruamel.yaml.clib-0.2.8-py312h66e93f0_1.conda Extracting setuptools-75.6.0-pyhff2d567_1.conda Extracting truststore-0.10.0-pyhd8ed1ab_0.conda Extracting wheel-0.45.1-pyhd8ed1ab_1.conda Extracting cffi-1.17.1-py312h06ac9bb_0.conda Extracting h2-4.1.0-pyhd8ed1ab_1.conda Extracting jsonpatch-1.33-pyhd8ed1ab_1.conda Extracting libmambapy-1.5.12-py312hbaee817_0.conda Extracting pip-24.3.1-pyh8b19718_2.conda Extracting ruamel.yaml-0.18.8-py312h66e93f0_0.conda Extracting tqdm-4.67.1-pyhd8ed1ab_1.conda Extracting zstandard-0.23.0-py312hef9b889_1.conda Extracting conda-package-streaming-0.11.0-pyhd8ed1ab_0.conda Extracting urllib3-2.3.0-pyhd8ed1ab_0.conda Extracting conda-package-handling-2.4.0-pyha770c72_1.conda Extracting requests-2.32.3-pyhd8ed1ab_1.conda Extracting conda-24.11.2-py312h7900ff3_1.conda Extracting conda-libmamba-solver-24.9.0-pyhd8ed1ab_0.conda Extracting mamba-1.5.12-py312h9460a1c_0.conda Installing base environment... Transaction Prefix: /bme/home/liuj19/sct_7.1/python Updating specs: - conda-forge/linux-64::_libgcc_mutex==0.1=conda_forge[md5=d7c89558ba9fa0495403155b64376d81] - conda-forge/linux-64::ca-certificates==2024.12.14=hbcca054_0[md5=720523eb0d6a9b0f6120c16b2aa4e7de] - conda-forge/linux-64::ld_impl_linux-64==2.43=h712a8e2_2[md5=048b02e3962f066da18efe3a21b77672] - conda-forge/noarch::pybind11-abi==4=hd8ed1ab_3[md5=878f923dd6acc8aeb47a75da6c4098be] - conda-forge/linux-64::python_abi==3.12=5_cp312[md5=0424ae29b104430108f5218a66db7260] - conda-forge/noarch::tzdata==2024b=hc8b5060_0[md5=8ac3367aafb1cc0a068483c580af8015] - conda-forge/linux-64::libgomp==14.2.0=h77fa898_1[md5=cc3573974587f12dda90d96e3e55a702] - conda-forge/linux-64::_openmp_mutex==4.5=2_gnu[md5=73aaf86a425cc6e73fcf236a5a46396d] - conda-forge/linux-64::libgcc==14.2.0=h77fa898_1[md5=3cb76c3f10d3bc7f1105b2fc9db984df] - conda-forge/linux-64::c-ares==1.34.4=hb9d3cd8_0[md5=e2775acf57efd5af15b8e3d1d74d72d3] - conda-forge/linux-64::libexpat==2.6.4=h5888daf_0[md5=db833e03127376d461e1e13e76f09b6c] - conda-forge/linux-64::libgcc-ng==14.2.0=h69a702a_1[md5=e39480b9ca41323497b05492a63bc35b] - conda-forge/linux-64::liblzma==5.6.3=hb9d3cd8_1[md5=2ecf2f1c7e4e21fcfe6423a51a992d84] - conda-forge/linux-64::libstdcxx==14.2.0=hc0a3c3a_1[md5=234a5554c53625688d51062645337328] - conda-forge/linux-64::libzlib==1.3.1=hb9d3cd8_2[md5=edb0dca6bc32e4f4789199455a1dbeb8] - conda-forge/linux-64::openssl==3.4.0=hb9d3cd8_0[md5=23cc74f77eb99315c0360ec3533147a9] - conda-forge/linux-64::reproc==14.2.5.post0=hb9d3cd8_0[md5=69fbc0a9e42eb5fe6733d2d60d818822] - conda-forge/linux-64::bzip2==1.0.8=h4bc722e_7[md5=62ee74e96c5ebb0af99386de58cf9553] - conda-forge/linux-64::keyutils==1.6.1=h166bdaf_0[md5=30186d27e2c9fa62b45fb1476b7200e3] - conda-forge/linux-64::libev==4.33=hd590300_2[md5=172bf1cd1ff8629f2b1179945ed45055] - conda-forge/linux-64::libffi==3.4.2=h7f98852_5[md5=d645c6d2ac96843a2bfaccd2d62b3ac3] - conda-forge/linux-64::libiconv==1.17=hd590300_2[md5=d66573916ffcf376178462f1b61c941e] - conda-forge/linux-64::libnsl==2.0.1=hd590300_0[md5=30fd6e37fe21f86f4bd26d6ee73eeec7] - conda-forge/linux-64::libsqlite==3.47.2=hee588c1_0[md5=b58da17db24b6e08bcbf8fed2fb8c915] - conda-forge/linux-64::libssh2==1.11.1=hf672d98_0[md5=be2de152d8073ef1c01b7728475f2fe7] - conda-forge/linux-64::libstdcxx-ng==14.2.0=h4852527_1[md5=8371ac6457591af2cf6159439c1fd051] - conda-forge/linux-64::libuuid==2.38.1=h0b41bf4_0[md5=40b61aab5c7ba9ff276c41cfffe6b80b] - conda-forge/linux-64::libxcrypt==4.4.36=hd590300_1[md5=5aa797f8787fe7a17d1b0821485b5adc] - conda-forge/linux-64::lz4-c==1.10.0=h5888daf_1[md5=9de5350a85c4a20c685259b889aa6393] - conda-forge/linux-64::lzo==2.10=hd590300_1001[md5=ec7398d21e2651e0dcb0044d03b9a339] - conda-forge/linux-64::ncurses==6.5=he02047a_1[md5=70caf8bb6cf39a0b6b7efc885f51c0fe] - conda-forge/linux-64::reproc-cpp==14.2.5.post0=h5888daf_0[md5=828302fca535f9cfeb598d5f7c204323] - conda-forge/linux-64::tk==8.6.13=noxft_h4845f30_101[md5=d453b98d9c83e71da0741bb0ff4d76bc] - conda-forge/linux-64::fmt==11.0.2=h434a139_0[md5=995f7e13598497691c1dc476d889bc04] - conda-forge/linux-64::libedit==3.1.20191231=he28a2e2_2[md5=4d331e44109e3f0e19b4cb8f9b82f3e1] - conda-forge/linux-64::libnghttp2==1.64.0=h161d5f1_0[md5=19e57602824042dfd0446292ef90488b] - conda-forge/linux-64::libsolv==0.7.30=h3509ff9_0[md5=02539b77d25aa4f65b20246549e256c3] - conda-forge/linux-64::libxml2==2.13.5=h0d44e9d_1[md5=f5b05674697ae7d2c5932766695945e1] - conda-forge/linux-64::readline==8.2=h8228510_1[md5=47d31b792659ce70f470b5c82fdfb7a4] - conda-forge/linux-64::yaml-cpp==0.8.0=h59595ed_0[md5=965eaacd7c18eb8361fd12bb9e7a57d7] - conda-forge/linux-64::zstd==1.5.6=ha6fb4c9_0[md5=4d056880988120e29d75bfff282e0f45] - conda-forge/linux-64::krb5==1.21.3=h659f571_0[md5=3f43953b7d3fb3aaa1d0d0723d91e368] - conda-forge/linux-64::libarchive==3.7.7=h4585015_3[md5=a28808eae584c7f519943719b2a2b386] - conda-forge/linux-64::python==3.12.8=h9e4cc4f_1_cpython[md5=7fd2fd79436d9b473812f14e86746844] - conda-forge/linux-64::libcurl==8.11.1=h332b0f4_0[md5=2b3e0081006dc21e8bf53a91c83a055c] - conda-forge/linux-64::menuinst==2.2.0=py312h7900ff3_0[md5=f22f8e77b36e67297feffe03eefd5375] - conda-forge/noarch::archspec==0.2.3=pyhd8ed1ab_0[md5=192278292e20704f663b9c766909d67b] - conda-forge/noarch::boltons==24.0.0=pyhd8ed1ab_1[md5=d88c38e66d85ecc9c7e2c4110676bbf4] - conda-forge/linux-64::brotli-python==1.1.0=py312h2ec8cdc_2[md5=b0b867af6fc74b2a0aa206da29c0f3cf] - conda-forge/noarch::certifi==2024.12.14=pyhd8ed1ab_0[md5=6feb87357ecd66733be3279f16a8c400] - conda-forge/noarch::charset-normalizer==3.4.1=pyhd8ed1ab_0[md5=e83a31202d1c0a000fce3e9cf3825875] - conda-forge/noarch::colorama==0.4.6=pyhd8ed1ab_1[md5=962b9857ee8e7018c22f2776ffa0b2d7] - conda-forge/noarch::distro==1.9.0=pyhd8ed1ab_1[md5=0a2014fd9860f8b1eaa0b1f3d3771a08] - conda-forge/linux-64::frozendict==2.4.6=py312h66e93f0_0[md5=9fa8408745a0621314b7751d11fecc18] - conda-forge/noarch::hpack==4.0.0=pyhd8ed1ab_1[md5=2aa5ff7fa34a81b9196532c84c10d865] - conda-forge/noarch::hyperframe==6.0.1=pyhd8ed1ab_1[md5=566e75c90c1d0c8c459eb0ad9833dc7a] - conda-forge/noarch::idna==3.10=pyhd8ed1ab_1[md5=39a4f67be3286c86d696df570b1201b7] - conda-forge/linux-64::jsonpointer==3.0.0=py312h7900ff3_1[md5=6b51f7459ea4073eeb5057207e2e1e3d] - conda-forge/linux-64::libmamba==1.5.12=h49b8a8d_0[md5=d6aec145c4f2473c09c2699d74f6dfc0] - conda-forge/noarch::packaging==24.2=pyhd8ed1ab_2[md5=3bfed7e6228ebf2f7b9eaa47f1b4e2aa] - conda-forge/noarch::platformdirs==4.3.6=pyhd8ed1ab_1[md5=577852c7e53901ddccc7e6a9959ddebe] - conda-forge/noarch::pluggy==1.5.0=pyhd8ed1ab_1[md5=e9dcbce5f45f9ee500e728ae58b605b6] - conda-forge/linux-64::pycosat==0.6.6=py312h66e93f0_2[md5=08223e6a73e0bca5ade16ec4cebebf23] - conda-forge/noarch::pycparser==2.22=pyh29332c3_1[md5=12c566707c80111f9799308d9e265aef] - conda-forge/noarch::pysocks==1.7.1=pyha55dd90_7[md5=461219d1a5bd61342293efa2c0c90eac] - conda-forge/linux-64::ruamel.yaml.clib==0.2.8=py312h66e93f0_1[md5=532c3e5d0280be4fea52396ec1fa7d5d] - conda-forge/noarch::setuptools==75.6.0=pyhff2d567_1[md5=fc80f7995e396cbaeabd23cf46c413dc] - conda-forge/noarch::truststore==0.10.0=pyhd8ed1ab_0[md5=ad1c20cd193e3044bcf17798c33b9d67] - conda-forge/noarch::wheel==0.45.1=pyhd8ed1ab_1[md5=75cb7132eb58d97896e173ef12ac9986] - conda-forge/linux-64::cffi==1.17.1=py312h06ac9bb_0[md5=a861504bbea4161a9170b85d4d2be840] - conda-forge/noarch::h2==4.1.0=pyhd8ed1ab_1[md5=825927dc7b0f287ef8d4d0011bb113b1] - conda-forge/noarch::jsonpatch==1.33=pyhd8ed1ab_1[md5=cb60ae9cf02b9fcb8004dec4089e5691] - conda-forge/linux-64::libmambapy==1.5.12=py312hbaee817_0[md5=88dd983e44c86cdde2817ecfa7d84d5a] - conda-forge/noarch::pip==24.3.1=pyh8b19718_2[md5=04e691b9fadd93a8a9fad87a81d4fd8f] - conda-forge/linux-64::ruamel.yaml==0.18.8=py312h66e93f0_0[md5=b77952bccd6b8d5c46e2f54354b4296b] - conda-forge/noarch::tqdm==4.67.1=pyhd8ed1ab_1[md5=9efbfdc37242619130ea42b1cc4ed861] - conda-forge/linux-64::zstandard==0.23.0=py312hef9b889_1[md5=8b7069e9792ee4e5b4919a7a306d2e67] - conda-forge/noarch::conda-package-streaming==0.11.0=pyhd8ed1ab_0[md5=bc9533d8616a97551ed144789bf9c1cd] - conda-forge/noarch::urllib3==2.3.0=pyhd8ed1ab_0[md5=32674f8dbfb7b26410ed580dd3c10a29] - conda-forge/noarch::conda-package-handling==2.4.0=pyha770c72_1[md5=28b86d110bda4ef40e680d1afa9ddb1d] - conda-forge/noarch::requests==2.32.3=pyhd8ed1ab_1[md5=a9b9368f3701a417eac9edbcae7cb737] - conda-forge/linux-64::conda==24.11.2=py312h7900ff3_1[md5=2dff8a88fb65b9c99f6c28aad1126c66] - conda-forge/noarch::conda-libmamba-solver==24.9.0=pyhd8ed1ab_0[md5=45378d089c5f72c9c0d63d58414c645d] - conda-forge/linux-64::mamba==1.5.12=py312h9460a1c_0[md5=59a9360536caad98732fdfdc320e41dc] Package Version Build Channel Size ───────────────────────────────────────────────────────────────────────────────────── Install: ───────────────────────────────────────────────────────────────────────────────────── + _libgcc_mutex 0.1 conda_forge conda-forge + ca-certificates 2024.12.14 hbcca054_0 conda-forge + ld_impl_linux-64 2.43 h712a8e2_2 conda-forge + pybind11-abi 4 hd8ed1ab_3 conda-forge + python_abi 3.12 5_cp312 conda-forge + tzdata 2024b hc8b5060_0 conda-forge + libgomp 14.2.0 h77fa898_1 conda-forge + _openmp_mutex 4.5 2_gnu conda-forge + libgcc 14.2.0 h77fa898_1 conda-forge + c-ares 1.34.4 hb9d3cd8_0 conda-forge + libexpat 2.6.4 h5888daf_0 conda-forge + libgcc-ng 14.2.0 h69a702a_1 conda-forge + liblzma 5.6.3 hb9d3cd8_1 conda-forge + libstdcxx 14.2.0 hc0a3c3a_1 conda-forge + libzlib 1.3.1 hb9d3cd8_2 conda-forge + openssl 3.4.0 hb9d3cd8_0 conda-forge + reproc 14.2.5.post0 hb9d3cd8_0 conda-forge + bzip2 1.0.8 h4bc722e_7 conda-forge + keyutils 1.6.1 h166bdaf_0 conda-forge + libev 4.33 hd590300_2 conda-forge + libffi 3.4.2 h7f98852_5 conda-forge + libiconv 1.17 hd590300_2 conda-forge + libnsl 2.0.1 hd590300_0 conda-forge + libsqlite 3.47.2 hee588c1_0 conda-forge + libssh2 1.11.1 hf672d98_0 conda-forge + libstdcxx-ng 14.2.0 h4852527_1 conda-forge + libuuid 2.38.1 h0b41bf4_0 conda-forge + libxcrypt 4.4.36 hd590300_1 conda-forge + lz4-c 1.10.0 h5888daf_1 conda-forge + lzo 2.10 hd590300_1001 conda-forge + ncurses 6.5 he02047a_1 conda-forge + reproc-cpp 14.2.5.post0 h5888daf_0 conda-forge + tk 8.6.13 noxft_h4845f30_101 conda-forge + fmt 11.0.2 h434a139_0 conda-forge + libedit 3.1.20191231 he28a2e2_2 conda-forge + libnghttp2 1.64.0 h161d5f1_0 conda-forge + libsolv 0.7.30 h3509ff9_0 conda-forge + libxml2 2.13.5 h0d44e9d_1 conda-forge + readline 8.2 h8228510_1 conda-forge + yaml-cpp 0.8.0 h59595ed_0 conda-forge + zstd 1.5.6 ha6fb4c9_0 conda-forge + krb5 1.21.3 h659f571_0 conda-forge + libarchive 3.7.7 h4585015_3 conda-forge + python 3.12.8 h9e4cc4f_1_cpython conda-forge + libcurl 8.11.1 h332b0f4_0 conda-forge + menuinst 2.2.0 py312h7900ff3_0 conda-forge + archspec 0.2.3 pyhd8ed1ab_0 conda-forge + boltons 24.0.0 pyhd8ed1ab_1 conda-forge + brotli-python 1.1.0 py312h2ec8cdc_2 conda-forge + certifi 2024.12.14 pyhd8ed1ab_0 conda-forge + charset-normalizer 3.4.1 pyhd8ed1ab_0 conda-forge + colorama 0.4.6 pyhd8ed1ab_1 conda-forge + distro 1.9.0 pyhd8ed1ab_1 conda-forge + frozendict 2.4.6 py312h66e93f0_0 conda-forge + hpack 4.0.0 pyhd8ed1ab_1 conda-forge + hyperframe 6.0.1 pyhd8ed1ab_1 conda-forge + idna 3.10 pyhd8ed1ab_1 conda-forge + jsonpointer 3.0.0 py312h7900ff3_1 conda-forge + libmamba 1.5.12 h49b8a8d_0 conda-forge + packaging 24.2 pyhd8ed1ab_2 conda-forge + platformdirs 4.3.6 pyhd8ed1ab_1 conda-forge + pluggy 1.5.0 pyhd8ed1ab_1 conda-forge + pycosat 0.6.6 py312h66e93f0_2 conda-forge + pycparser 2.22 pyh29332c3_1 conda-forge + pysocks 1.7.1 pyha55dd90_7 conda-forge + ruamel.yaml.clib 0.2.8 py312h66e93f0_1 conda-forge + setuptools 75.6.0 pyhff2d567_1 conda-forge + truststore 0.10.0 pyhd8ed1ab_0 conda-forge + wheel 0.45.1 pyhd8ed1ab_1 conda-forge + cffi 1.17.1 py312h06ac9bb_0 conda-forge + h2 4.1.0 pyhd8ed1ab_1 conda-forge + jsonpatch 1.33 pyhd8ed1ab_1 conda-forge + libmambapy 1.5.12 py312hbaee817_0 conda-forge + pip 24.3.1 pyh8b19718_2 conda-forge + ruamel.yaml 0.18.8 py312h66e93f0_0 conda-forge + tqdm 4.67.1 pyhd8ed1ab_1 conda-forge + zstandard 0.23.0 py312hef9b889_1 conda-forge + conda-package-streaming 0.11.0 pyhd8ed1ab_0 conda-forge + urllib3 2.3.0 pyhd8ed1ab_0 conda-forge + conda-package-handling 2.4.0 pyha770c72_1 conda-forge + requests 2.32.3 pyhd8ed1ab_1 conda-forge + conda 24.11.2 py312h7900ff3_1 conda-forge + conda-libmamba-solver 24.9.0 pyhd8ed1ab_0 conda-forge + mamba 1.5.12 py312h9460a1c_0 conda-forge Summary: Install: 84 packages Total download: 0 B ───────────────────────────────────────────────────────────────────────────────────── Transaction starting Transaction finished To activate this environment, use: micromamba activate /bme/home/liuj19/sct_7.1/python Or to execute a single command in this environment, use: micromamba run -p /bme/home/liuj19/sct_7.1/python mycommand installation finished. Creating conda environment... Retrieving notices: done Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ==> WARNING: A newer version of conda exists. <== current version: 24.11.2 latest version: 25.9.0 Please update conda by running $ conda update -n base -c conda-forge conda ## Package Plan ## environment location: /home/liuj19/sct_7.1/python/envs/venv_sct added / updated specs: - python=3.10 The following packages will be downloaded: package | build ---------------------------|----------------- bzip2-1.0.8 | hda65f42_8 254 KB conda-forge ca-certificates-2025.10.5 | hbd8a1cb_0 152 KB conda-forge ld_impl_linux-64-2.44 | ha97dd6f_2 730 KB conda-forge libexpat-2.7.1 | hecca717_0 73 KB conda-forge libffi-3.4.6 | h2dba641_1 56 KB conda-forge libgcc-15.2.0 | h767d61c_7 803 KB conda-forge libgcc-ng-15.2.0 | h69a702a_7 29 KB conda-forge libgomp-15.2.0 | h767d61c_7 437 KB conda-forge liblzma-5.8.1 | hb9d3cd8_2 110 KB conda-forge libnsl-2.0.1 | hb9d3cd8_1 33 KB conda-forge libsqlite-3.50.4 | h0c1763c_0 911 KB conda-forge libuuid-2.41.2 | he9a06e4_0 36 KB conda-forge ncurses-6.5 | h2d0b736_3 871 KB conda-forge openssl-3.5.4 | h26f9b46_0 3.0 MB conda-forge pip-25.2 | pyh8b19718_0 1.1 MB conda-forge python-3.10.18 |hd6af730_0_cpython 23.9 MB conda-forge readline-8.2 | h8c095d6_2 276 KB conda-forge setuptools-80.9.0 | pyhff2d567_0 731 KB conda-forge tk-8.6.13 |noxft_hd72426e_102 3.1 MB conda-forge tzdata-2025b | h78e105d_0 120 KB conda-forge ------------------------------------------------------------ Total: 36.6 MB The following NEW packages will be INSTALLED: _libgcc_mutex conda-forge/linux-64::_libgcc_mutex-0.1-conda_forge _openmp_mutex conda-forge/linux-64::_openmp_mutex-4.5-2_gnu bzip2 conda-forge/linux-64::bzip2-1.0.8-hda65f42_8 ca-certificates conda-forge/noarch::ca-certificates-2025.10.5-hbd8a1cb_0 ld_impl_linux-64 conda-forge/linux-64::ld_impl_linux-64-2.44-ha97dd6f_2 libexpat conda-forge/linux-64::libexpat-2.7.1-hecca717_0 libffi conda-forge/linux-64::libffi-3.4.6-h2dba641_1 libgcc conda-forge/linux-64::libgcc-15.2.0-h767d61c_7 libgcc-ng conda-forge/linux-64::libgcc-ng-15.2.0-h69a702a_7 libgomp conda-forge/linux-64::libgomp-15.2.0-h767d61c_7 liblzma conda-forge/linux-64::liblzma-5.8.1-hb9d3cd8_2 libnsl conda-forge/linux-64::libnsl-2.0.1-hb9d3cd8_1 libsqlite conda-forge/linux-64::libsqlite-3.50.4-h0c1763c_0 libuuid conda-forge/linux-64::libuuid-2.41.2-he9a06e4_0 libxcrypt conda-forge/linux-64::libxcrypt-4.4.36-hd590300_1 libzlib conda-forge/linux-64::libzlib-1.3.1-hb9d3cd8_2 ncurses conda-forge/linux-64::ncurses-6.5-h2d0b736_3 openssl conda-forge/linux-64::openssl-3.5.4-h26f9b46_0 pip conda-forge/noarch::pip-25.2-pyh8b19718_0 python conda-forge/linux-64::python-3.10.18-hd6af730_0_cpython readline conda-forge/linux-64::readline-8.2-h8c095d6_2 setuptools conda-forge/noarch::setuptools-80.9.0-pyhff2d567_0 tk conda-forge/linux-64::tk-8.6.13-noxft_hd72426e_102 tzdata conda-forge/noarch::tzdata-2025b-h78e105d_0 wheel conda-forge/noarch::wheel-0.45.1-pyhd8ed1ab_1 done Preparing transaction: done Verifying transaction: done Executing transaction: done # # To activate this environment, use # # $ conda activate /home/liuj19/sct_7.1/python/envs/venv_sct # # To deactivate an active environment, use # # $ conda deactivate Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ==> WARNING: A newer version of conda exists. <== current version: 24.11.2 latest version: 25.9.0 Please update conda by running $ conda update -n base -c conda-forge conda ## Package Plan ## environment location: /home/liuj19/sct_7.1/python/envs/venv_sct added / updated specs: - libstdcxx-ng The following packages will be downloaded: package | build ---------------------------|----------------- libstdcxx-15.2.0 | h8f9b012_7 3.7 MB conda-forge libstdcxx-ng-15.2.0 | h4852527_7 29 KB conda-forge ------------------------------------------------------------ Total: 3.7 MB The following NEW packages will be INSTALLED: libstdcxx conda-forge/linux-64::libstdcxx-15.2.0-h8f9b012_7 libstdcxx-ng conda-forge/linux-64::libstdcxx-ng-15.2.0-h4852527_7 done Preparing transaction: done Verifying transaction: done Executing transaction: done Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ==> WARNING: A newer version of conda exists. <== current version: 24.11.2 latest version: 25.9.0 Please update conda by running $ conda update -n base -c conda-forge conda # All requested packages already installed. Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ==> WARNING: A newer version of conda exists. <== current version: 24.11.2 latest version: 25.9.0 Please update conda by running $ conda update -n base -c conda-forge conda ## Package Plan ## environment location: /home/liuj19/sct_7.1/python/envs/venv_sct added / updated specs: - xorg-libxinerama The following packages will be downloaded: package | build ---------------------------|----------------- libxcb-1.17.0 | h8a09558_0 387 KB conda-forge pthread-stubs-0.4 | hb9d3cd8_1002 8 KB conda-forge xorg-libx11-1.8.12 | h4f16b4b_0 816 KB conda-forge xorg-libxau-1.0.12 | hb9d3cd8_0 14 KB conda-forge xorg-libxdmcp-1.1.5 | hb9d3cd8_0 19 KB conda-forge xorg-libxext-1.3.6 | hb9d3cd8_0 49 KB conda-forge xorg-libxinerama-1.1.5 | h5888daf_1 14 KB conda-forge ------------------------------------------------------------ Total: 1.3 MB The following NEW packages will be INSTALLED: libxcb conda-forge/linux-64::libxcb-1.17.0-h8a09558_0 pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-hb9d3cd8_1002 xorg-libx11 conda-forge/linux-64::xorg-libx11-1.8.12-h4f16b4b_0 xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.12-hb9d3cd8_0 xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.5-hb9d3cd8_0 xorg-libxext conda-forge/linux-64::xorg-libxext-1.3.6-hb9d3cd8_0 xorg-libxinerama conda-forge/linux-64::xorg-libxinerama-1.1.5-h5888daf_1 done Preparing transaction: done Verifying transaction: done Executing transaction: done Requirement already satisfied: pip!=21.2.* in ./python/envs/venv_sct/lib/python3.10/site-packages (25.2) Installing Python dependencies... Using requirements-freeze.txt (release installation) Looking in indexes: https://pypi.org/simple, https://download.pytorch.org/whl/cpu Ignoring msvc-runtime: markers 'sys_platform == "win32"' don't match your environment Collecting certifi Downloading certifi-2025.10.5-py3-none-any.whl.metadata (2.5 kB) Collecting absl-py==2.3.1 (from -r requirements-freeze.txt (line 1)) Downloading absl_py-2.3.1-py3-none-any.whl.metadata (3.3 kB) Collecting acres==0.5.0 (from -r requirements-freeze.txt (line 2)) Downloading acres-0.5.0-py3-none-any.whl.metadata (6.2 kB) Collecting acvl_utils==0.2.5 (from -r requirements-freeze.txt (line 3)) Downloading acvl_utils-0.2.5.tar.gz (29 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting annotated-types==0.7.0 (from -r requirements-freeze.txt (line 4)) Downloading annotated_types-0.7.0-py3-none-any.whl.metadata (15 kB) Collecting astor==0.8.1 (from -r requirements-freeze.txt (line 5)) Downloading astor-0.8.1-py2.py3-none-any.whl.metadata (4.2 kB) Collecting batchgenerators==0.25.1 (from -r requirements-freeze.txt (line 6)) Downloading batchgenerators-0.25.1.tar.gz (76 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting batchgeneratorsv2==0.3.0 (from -r requirements-freeze.txt (line 7)) Downloading batchgeneratorsv2-0.3.0.tar.gz (44 kB) Installing build dependencies: started Installing build dependencies: finished with status 'done' Getting requirements to build wheel: started Getting requirements to build wheel: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Collecting bids-validator==1.14.7.post0 (from -r requirements-freeze.txt (line 8)) Downloading bids_validator-1.14.7.post0-py3-none-any.whl.metadata (39 kB) Collecting bidsschematools==1.0.14 (from -r requirements-freeze.txt (line 9)) Downloading bidsschematools-1.0.14-py3-none-any.whl.metadata (3.2 kB) Collecting blosc2==3.7.1 (from -r requirements-freeze.txt (line 10)) Downloading blosc2-3.7.1-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (7.1 kB) Collecting certifi Downloading certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting charset-normalizer==3.4.3 (from -r requirements-freeze.txt (line 12)) Downloading charset_normalizer-3.4.3-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting click==8.2.1 (from -r requirements-freeze.txt (line 13)) Downloading click-8.2.1-py3-none-any.whl.metadata (2.5 kB) Collecting coloredlogs==15.0.1 (from -r requirements-freeze.txt (line 14)) Downloading coloredlogs-15.0.1-py2.py3-none-any.whl.metadata (12 kB) Collecting connected-components-3d==3.24.0 (from -r requirements-freeze.txt (line 15)) Downloading connected_components_3d-3.24.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (32 kB) Collecting contourpy==1.3.2 (from -r requirements-freeze.txt (line 16)) Downloading contourpy-1.3.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (5.5 kB) Collecting coverage==7.10.4 (from -r requirements-freeze.txt (line 17)) Downloading coverage-7.10.4-cp310-cp310-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (8.9 kB) Collecting csv-diff==1.2 (from -r requirements-freeze.txt (line 18)) Downloading csv_diff-1.2-py3-none-any.whl.metadata (5.3 kB) Collecting cycler==0.12.1 (from -r requirements-freeze.txt (line 19)) Using cached cycler-0.12.1-py3-none-any.whl.metadata (3.8 kB) Collecting Cython==3.1.3 (from -r requirements-freeze.txt (line 20)) Downloading cython-3.1.3-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (4.7 kB) Collecting deepdiff==8.6.0 (from -r requirements-freeze.txt (line 21)) Downloading deepdiff-8.6.0-py3-none-any.whl.metadata (8.3 kB) Collecting Deprecated==1.2.18 (from -r requirements-freeze.txt (line 22)) Downloading Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting dicom2nifti==2.6.2 (from -r requirements-freeze.txt (line 23)) Downloading dicom2nifti-2.6.2-py3-none-any.whl.metadata (1.5 kB) Collecting dictdiffer==0.9.0 (from -r requirements-freeze.txt (line 24)) Downloading dictdiffer-0.9.0-py2.py3-none-any.whl.metadata (4.8 kB) Collecting dipy==1.8.0 (from -r requirements-freeze.txt (line 25)) Downloading dipy-1.8.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.6 kB) Collecting docopt==0.6.2 (from -r requirements-freeze.txt (line 26)) Using cached docopt-0.6.2.tar.gz (25 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting dynamic_network_architectures==0.3.1 (from -r requirements-freeze.txt (line 27)) Downloading dynamic_network_architectures-0.3.1.tar.gz (20 kB) Preparing metadata (setup.py): started Preparing metadata (setup.py): finished with status 'done' Collecting einops==0.8.1 (from -r requirements-freeze.txt (line 28)) Downloading einops-0.8.1-py3-none-any.whl.metadata (13 kB) Collecting exceptiongroup==1.3.0 (from -r requirements-freeze.txt (line 29)) Downloading exceptiongroup-1.3.0-py3-none-any.whl.metadata (6.7 kB) Collecting filelock==3.19.1 (from -r requirements-freeze.txt (line 30)) Downloading filelock-3.19.1-py3-none-any.whl.metadata (2.1 kB) Collecting flatbuffers==25.2.10 (from -r requirements-freeze.txt (line 31)) Downloading flatbuffers-25.2.10-py2.py3-none-any.whl.metadata (875 bytes) Collecting fonttools==4.59.1 (from -r requirements-freeze.txt (line 32)) Downloading fonttools-4.59.1-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (108 kB) Collecting formulaic==0.3.4 (from -r requirements-freeze.txt (line 33)) Downloading formulaic-0.3.4-py3-none-any.whl.metadata (5.6 kB) Collecting fsspec==2025.7.0 (from -r requirements-freeze.txt (line 34)) Downloading fsspec-2025.7.0-py3-none-any.whl.metadata (12 kB) Collecting future==1.0.0 (from -r requirements-freeze.txt (line 35)) Downloading future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting gitdb==4.0.12 (from -r requirements-freeze.txt (line 36)) Downloading gitdb-4.0.12-py3-none-any.whl.metadata (1.2 kB) Collecting GitPython==3.1.45 (from -r requirements-freeze.txt (line 37)) Downloading gitpython-3.1.45-py3-none-any.whl.metadata (13 kB) Collecting graphviz==0.21 (from -r requirements-freeze.txt (line 38)) Downloading graphviz-0.21-py3-none-any.whl.metadata (12 kB) Collecting grpcio==1.74.0 (from -r requirements-freeze.txt (line 39)) Downloading grpcio-1.74.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.8 kB) Collecting gryds==0.0.9 (from -r requirements-freeze.txt (line 40)) Downloading gryds-0.0.9-py3-none-any.whl.metadata (1.0 kB) Collecting h5py==3.14.0 (from -r requirements-freeze.txt (line 41)) Downloading h5py-3.14.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting humanfriendly==10.0 (from -r requirements-freeze.txt (line 42)) Downloading humanfriendly-10.0-py2.py3-none-any.whl.metadata (9.2 kB) Collecting humanize==4.12.3 (from -r requirements-freeze.txt (line 43)) Downloading humanize-4.12.3-py3-none-any.whl.metadata (7.8 kB) Collecting idna==3.10 (from -r requirements-freeze.txt (line 44)) Downloading idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting imagecodecs==2025.3.30 (from -r requirements-freeze.txt (line 45)) Downloading imagecodecs-2025.3.30-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (20 kB) Collecting imageio==2.37.0 (from -r requirements-freeze.txt (line 46)) Downloading imageio-2.37.0-py3-none-any.whl.metadata (5.2 kB) Collecting importlib_resources==6.5.2 (from -r requirements-freeze.txt (line 47)) Downloading importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB) Collecting iniconfig==2.1.0 (from -r requirements-freeze.txt (line 48)) Downloading iniconfig-2.1.0-py3-none-any.whl.metadata (2.7 kB) Collecting interface-meta==1.3.0 (from -r requirements-freeze.txt (line 49)) Downloading interface_meta-1.3.0-py3-none-any.whl.metadata (6.7 kB) Collecting ivadomed==2.9.10 (from -r requirements-freeze.txt (line 50)) Downloading ivadomed-2.9.10-py3-none-any.whl.metadata (6.4 kB) Collecting Jinja2==3.1.6 (from -r requirements-freeze.txt (line 51)) Downloading jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB) Collecting joblib==1.5.1 (from -r requirements-freeze.txt (line 52)) Downloading joblib-1.5.1-py3-none-any.whl.metadata (5.6 kB) Collecting kiwisolver==1.4.9 (from -r requirements-freeze.txt (line 53)) Downloading kiwisolver-1.4.9-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl.metadata (6.3 kB) Collecting lazy_loader==0.4 (from -r requirements-freeze.txt (line 54)) Downloading lazy_loader-0.4-py3-none-any.whl.metadata (7.6 kB) Collecting linecache2==1.0.0 (from -r requirements-freeze.txt (line 55)) Downloading linecache2-1.0.0-py2.py3-none-any.whl.metadata (1000 bytes) Collecting loguru==0.7.3 (from -r requirements-freeze.txt (line 56)) Downloading loguru-0.7.3-py3-none-any.whl.metadata (22 kB) Collecting lxml==6.0.0 (from -r requirements-freeze.txt (line 57)) Downloading lxml-6.0.0-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (6.6 kB) Collecting Markdown==3.8.2 (from -r requirements-freeze.txt (line 58)) Downloading markdown-3.8.2-py3-none-any.whl.metadata (5.1 kB) Collecting markdown-it-py==4.0.0 (from -r requirements-freeze.txt (line 59)) Downloading markdown_it_py-4.0.0-py3-none-any.whl.metadata (7.3 kB) Collecting MarkupSafe==3.0.2 (from -r requirements-freeze.txt (line 60)) Downloading MarkupSafe-3.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.0 kB) Collecting matplotlib==3.10.5 (from -r requirements-freeze.txt (line 61)) Downloading matplotlib-3.10.5-cp310-cp310-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (11 kB) Collecting matplotlib-inline==0.1.7 (from -r requirements-freeze.txt (line 62)) Downloading matplotlib_inline-0.1.7-py3-none-any.whl.metadata (3.9 kB) Collecting mdurl==0.1.2 (from -r requirements-freeze.txt (line 63)) Downloading mdurl-0.1.2-py3-none-any.whl.metadata (1.6 kB) Collecting monai==1.4.0 (from -r requirements-freeze.txt (line 64)) Downloading monai-1.4.0-py3-none-any.whl.metadata (11 kB) Collecting mpmath==1.3.0 (from -r requirements-freeze.txt (line 65)) Using cached https://download.pytorch.org/whl/mpmath-1.3.0-py3-none-any.whl (536 kB) Collecting msgpack==1.1.1 (from -r requirements-freeze.txt (line 66)) Downloading msgpack-1.1.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.4 kB) Collecting ndindex==1.10.0 (from -r requirements-freeze.txt (line 67)) Downloading ndindex-1.10.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.6 kB) Collecting networkx==3.4.2 (from -r requirements-freeze.txt (line 68)) Downloading networkx-3.4.2-py3-none-any.whl.metadata (6.3 kB) Collecting neurite==0.2 (from -r requirements-freeze.txt (line 69)) Downloading neurite-0.2-py3-none-any.whl.metadata (653 bytes) Collecting nibabel==5.3.2 (from -r requirements-freeze.txt (line 70)) Downloading nibabel-5.3.2-py3-none-any.whl.metadata (9.1 kB) Collecting nilearn==0.10.4 (from -r requirements-freeze.txt (line 71)) Downloading nilearn-0.10.4-py3-none-any.whl.metadata (7.8 kB) Collecting nnunetv2==2.5.2 (from -r requirements-freeze.txt (line 72)) Downloading nnunetv2-2.5.2.tar.gz (200 kB) Installing build dependencies: started Installing build dependencies: finished with status 'done' Getting requirements to build wheel: started Getting requirements to build wheel: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Collecting num2words==0.5.14 (from -r requirements-freeze.txt (line 73)) Downloading num2words-0.5.14-py3-none-any.whl.metadata (13 kB) Collecting numexpr==2.11.0 (from -r requirements-freeze.txt (line 74)) Downloading numexpr-2.11.0.tar.gz (108 kB) Installing build dependencies: started Installing build dependencies: finished with status 'done' Getting requirements to build wheel: started Getting requirements to build wheel: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Collecting numpy==1.26.4 (from -r requirements-freeze.txt (line 75)) Downloading numpy-1.26.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (61 kB) Collecting onnx==1.16.1 (from -r requirements-freeze.txt (line 76)) Downloading onnx-1.16.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (16 kB) ERROR: Ignored the following versions that require a different python version: 1.3.3 Requires-Python >=3.11; 2.3.0 Requires-Python >=3.11; 2.3.1 Requires-Python >=3.11; 2.3.2 Requires-Python >=3.11; 2.3.3 Requires-Python >=3.11; 2.5.2 Requires-Python <3.9dev,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7; 2.7.0 Requires-Python >=3.6,<3.9; 2.7.1 Requires-Python >=3.6,<3.9; 2.7.2 Requires-Python >=3.6,<3.9; 2.7.4 Requires-Python >=3.6,<3.9; 2.8.0 Requires-Python >=3.6,<3.9; 2.9.0 Requires-Python >=3.6,<3.10; 2.9.1 Requires-Python >=3.6,<3.10; 2.9.2 Requires-Python >=3.6,<3.10; 2.9.3 Requires-Python >=3.6,<3.10; 2.9.4 Requires-Python >=3.6,<3.10; 2.9.5 Requires-Python >=3.6,<3.10; 2.9.6 Requires-Python >=3.7,<3.10; 2.9.6rc0 Requires-Python >=3.7,<3.10; 2025.8.2 Requires-Python >=3.11; 3.0.0 Requires-Python >=3.11; 3.1.0 Requires-Python >=3.11; 3.1.1 Requires-Python >=3.11; 3.2.0 Requires-Python >=3.11; 3.2.1 Requires-Python >=3.11; 3.3.0 Requires-Python >=3.11; 3.3.1 Requires-Python >=3.11; 3.5 Requires-Python >=3.11; 3.5rc0 Requires-Python >=3.11 ERROR: Could not find a version that satisfies the requirement onnxruntime==1.21.1 (from versions: 1.12.0, 1.12.1, 1.13.1, 1.14.0, 1.14.1, 1.15.0, 1.15.1, 1.16.0, 1.16.1, 1.16.2, 1.16.3) ERROR: No matching distribution found for onnxruntime==1.21.1 Failed running pip install: 1 Installation failed! Please find the file "/home/liuj19/sct_7.1/install_sct_log.txt", then upload it as a .txt attachment in a new topic on SCT's forum: --> https://forum.spinalcordmri.org/c/sct