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Spinal Cord Toolbox (5.3.0)

sct_propseg -i /home/sradonjic/ROSH-10008886_WHOLE_SPINE_IMAGES/MR_frame_0001.nii.gz -c t2 -CSF -o /home/sradonjic/ROSH-10008886_WHOLE_SPINE_IMAGES/SEGMENTATION_PROPSEG_5.3.0/seg.nii.gz -v 2
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Loaded /home/sradonjic/ROSH-10008886_WHOLE_SPINE_IMAGES/MR_frame_0001.nii.gz orientation ASL shape (261, 663, 60)
Loaded /home/sradonjic/ROSH-10008886_WHOLE_SPINE_IMAGES/MR_frame_0001.nii.gz orientation ASL shape (261, 663, 60)
Creating temporary folder (/tmp/sct-20210606132945.251434-label_vertebrae-_kz68any)
Creating temporary folder (/tmp/sct-20210606132945.407212-propseg-nsl509az)
Detecting the spinal cord using OptiC
Creating temporary folder (/tmp/sct-20210606132945.809135-x2gez30i)
Saving image to img_rpi_uint16.nii (/tmp/sct-20210606132945.809135-x2gez30i/img_rpi_uint16.nii) orientation RPI shape (60, 261, 663)
Loaded img_rpi_uint16_optic_ctr.hdr (/tmp/sct-20210606132945.809135-x2gez30i/img_rpi_uint16_optic_ctr.hdr) orientation RPI shape (60, 261, 663)
Saving image to /tmp/sct-20210606132945.251434-label_vertebrae-_kz68any/centerline_optic.nii.gz orientation ASL shape (261, 663, 60)
/mnt/algo/sct_5.3.0/bin/isct_propseg -t t2 -o /home/sradonjic/ROSH-10008886_WHOLE_SPINE_IMAGES/SEGMENTATION_PROPSEG_5.3.0 -verbose -mesh -centerline-binary -CSF -centerline-coord -cross -init-tube -low-resolution-mesh -i /tmp/sct-20210606132945.407212-propseg-nsl509az/MR_frame_0001_rescaled.nii.gz -init-centerline /tmp/sct-20210606132945.251434-label_vertebrae-_kz68any/centerline_optic.nii.gz -centerline-binary # in /mnt/algo/sct_5.3.0/bin
output => /mnt/algo/sct_5.3.0/bin/isct_propseg: /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.15' not found (required by /mnt/algo/sct_5.3.0/bin/isct_propseg)
Automatic cord detection failed. Please initialize using -init-centerline or -init-mask (see help)