-- Spinal Cord Toolbox (5.0.0) SCT info: - version: 5.0.0 - path: /Users/macpronirims/sct_5.0.0 OS: osx (Darwin-19.6.0-x86_64-i386-64bit) CPU cores: Available: 24, Used by ITK functions: 24 RAM: Total: 32768MB, Used: 18878MB, Available: 11275MB Check Python executable.............................[WARNING] Using system python which is unsupported: /Users/macpronirims/.pyenv/versions/3.6.9/bin/python3.6 Check if data are installed.........................[FAIL] Check if colored is installed.......................[OK] (1.4.2) Check if dipy is installed..........................[OK] (1.3.0) Check if futures is installed.......................[OK] Check if h5py is installed..........................[OK] (2.10.0) Check if ivadomed (2.4.0) is installed..............Generating new fontManager, this may take some time... Failed to extract font properties from /System/Library/Fonts/LastResort.otf: tuple indices must be integers or slices, not str Failed to extract font properties from /System/Library/Fonts/Supplemental/NISC18030.ttf: In FT2Font: Could not set the fontsize (error code 0x17) Failed to extract font properties from /System/Library/Fonts/Apple Color Emoji.ttc: In FT2Font: Could not set the fontsize (error code 0x17) /Users/macpronirims/.pyenv/versions/3.6.9/lib/python3.6/site-packages/onnxruntime/capi/_pybind_state.py:14: UserWarning: Cannot load onnxruntime.capi. Error: 'dlopen(/Users/macpronirims/.pyenv/versions/3.6.9/lib/python3.6/site-packages/onnxruntime/capi/onnxruntime_pybind11_state.so, 2): Library not loaded: /usr/local/opt/libomp/lib/libomp.dylib Referenced from: /Users/macpronirims/.pyenv/versions/3.6.9/lib/python3.6/site-packages/onnxruntime/capi/onnxruntime_pybind11_state.so Reason: image not found'. warnings.warn("Cannot load onnxruntime.capi. Error: '{0}'.".format(str(e))) [FAIL] cannot import name 'get_all_providers' Check if Keras (2.1.5) is installed.................[OK] (2.1.5) Check if matplotlib is installed....................[OK] (3.3.2) Check if nibabel is installed.......................[OK] (3.2.0) Check if numpy is installed.........................[OK] (1.19.4) Check if pandas is installed........................[OK] (1.1.4) Check if psutil is installed........................[OK] (5.7.3) Check if pyqt5 (5.11.3) is installed................[OK] (5.11.3) Check if pytest is installed........................[OK] (6.1.2) Check if pytest-cov is installed....................[OK] (__version__ = '2.10.1') Check if raven is installed.........................[OK] Check if requests is installed......................[OK] (2.24.0) Check if requirements-parser is installed...........[OK] (0.2.0) Check if scipy is installed.........................[OK] (1.5.4) Check if scikit-image is installed..................[OK] (0.17.2) Check if scikit-learn is installed..................[OK] (0.23.2) Check if tensorflow (1.5.0) is installed............[OK] (1.5.0) Check if torch (1.5.0) is installed.................[OK] (1.5.0) Check if torchvision (0.6.0) is installed...........[OK] (0.6.0) Check if xlwt is installed..........................[OK] (1.3.0) Check if tqdm is installed..........................[OK] (4.51.0) Check if transforms3d is installed..................[OK] (0.3.1) Check if urllib3 is installed.......................[OK] (1.25.11) Check if pytest_console_scripts is installed........[OK] Check if pytest-xdist is installed..................[OK] (2.1.0) Check if spinalcordtoolbox is installed.............[OK] Check ANTs compatibility with OS ...................[OK] Check PropSeg compatibility with OS ................[OK] Check if DISPLAY variable is set....................[OK] Check if figure can be opened with PyQt.............[OK]