Description
I wanted to view my results. But fsleyes opens and shut downs within a second with a message : “Failed to load plugin file /Users/cesarfarah/.fsleyes/plugins/sct_plugin.py: invalid syntax (sct_plugin.py, line 23)”
Commands and terminal output
> (base) Cesars-MacBook-Pro:docker cesarfarah$ fsleyes
Failed to load plugin file /Users/cesarfarah/.fsleyes/plugins/sct_plugin.py: invalid syntax (sct_plugin.py, line 23)
sct_check_dependencies
SCT info:
- version: 5.2.0
- path: /Users/cesarfarah/sct_5.2.0
OS: osx (Darwin-18.7.0-x86_64-i386-64bit)
CPU cores: Available: 4, Used by ITK functions: 4
RAM: Total: 8192MB, Used: 4068MB, Available: 3077MB
Check Python executable.............................[OK]
Using bundled python 3.6.13 |Anaconda, Inc.| (default, Feb 23 2021, 12:58:59)
[GCC Clang 10.0.0 ] at /Users/cesarfarah/sct_5.2.0/python/envs/venv_sct/bin/python
Check if data are installed.........................[OK]
Check if colored is installed.......................[OK] (1.4.2)
Check if dipy is installed..........................[OK] (1.3.0)
Check if futures is installed.......................[OK]
Check if h5py is installed..........................[OK] (2.10.0)
Check if Keras (2.1.5) is installed.................[OK] (2.1.5)
Check if ivadomed (2.7.2) is installed..............[OK] (2.7.2)
Check if matplotlib is installed....................[OK] (3.3.4)
Check if nibabel is installed.......................[OK] (3.2.1)
Check if numpy is installed.........................[OK] (1.19.5)
Check if onnxruntime (1.4.0) is installed...........[OK] (1.4.0)
Check if pandas is installed........................[OK] (1.1.5)
Check if psutil is installed........................[OK] (5.8.0)
Check if pyqt5 (5.11.3) is installed................[OK] (5.11.3)
Check if pytest is installed........................[OK] (6.2.2)
Check if pytest-cov is installed....................[OK] (__version__ = '2.11.1')
Check if raven is installed.........................[OK]
Check if requests is installed......................[OK] (2.25.1)
Check if requirements-parser is installed...........[OK] (0.2.0)
Check if scipy is installed.........................[OK] (1.5.4)
Check if scikit-image is installed..................[OK] (0.17.2)
Check if scikit-learn is installed..................[OK] (0.24.1)
Check if tensorflow (1.5.0) is installed............[OK] (1.5.0)
Check if torch (1.5.0) is installed.................[OK] (1.5.0)
Check if torchvision (0.6.0) is installed...........[OK] (0.6.0)
Check if xlwt is installed..........................[OK] (1.3.0)
Check if tqdm is installed..........................[OK] (4.57.0)
Check if transforms3d is installed..................[OK] (0.3.1)
Check if urllib3 is installed.......................[OK] (1.26.3)
Check if pytest_console_scripts is installed........[OK]
Check if spinalcordtoolbox is installed.............[OK]
Check ANTs compatibility with OS ...................[OK]
Check PropSeg compatibility with OS ................[OK]
Check if DISPLAY variable is set....................[OK]
Check if figure can be opened with PyQt.............[OK]
