Latest SCT topics - Spinalcordmri.org

Topic	Replies	Views	Activity
➤ New release: SCT v7.1 Dear SCT users, We are happy to announce the release of SCT v7.1. :tada: The most notable changes for this release include: Installation: Add support for Apptainer installations for use on HPC systems. View pull requ…	2	133	August 19, 2025
➤ New release: SCT v7.0 Dear SCT users, We are happy to announce the release of SCT v7.0. :tada: The most notable changes for this major release include: Feature: Overhauled sct_deepseg syntax, interface, and model names. View Model Gallery …	7	235	August 19, 2025
📣 New release: SCT v6.3 Dear SCT users, We are happy to announce the release of SCT v6.3. :tada: The most notable changes for this release include: Feature: Add QC report for sct_deepseg. View pull request Feature: Add CanProCo-based MS les…	3	567	August 9, 2024
New problems about the atlas pics	0	4	October 7, 2025
Some problems with MSCC	3	53	September 24, 2025
"Joint PDF summed to zero" error at the motion correction step for DTI algorithm	4	96	September 22, 2025
"Joint PDF summed to zero" error encountered during motion correction step	8	305	September 3, 2025
How to compute CSA from brain data	4	1621	August 30, 2025
Some questions about the registering template to dMRI of lumbar enlargement area	13	360	August 19, 2025
Installing SCT-7.0; Undefined symbol in ../site-packages/PyQt5/QtCore.so	11	330	August 19, 2025
Local DTI extraction results don't match the values given in the tutorial	2	107	August 17, 2025
"max() arg is an empty sequence" error during ANTs check in `sct_check_dependencies`	5	244	August 17, 2025
How to stitch together different spinal cord segments' DTI images (e.g., cervical-thoracic, thoracic-lumbar)?	1	177	August 17, 2025
How to upgrade SCT 6.4 to 7.0 on Windows	9	240	July 25, 2025
Can't install `sct_deepseg` task due to network errors	12	343	July 18, 2025
SCT v6.5 installation fails due to "failed to connect to github.com" error	11	273	July 10, 2025
Issue with C2-C5 volume	1	133	July 3, 2025
Issue with Motion correction and size of data	3	188	June 12, 2025
Issue installing sct 7.0 on linux	3	217	June 6, 2025
Issue with Spinal Cord Toolbox GPU Installation	2	226	May 29, 2025
Further subdivide the segmented gray matter and white matter regions of interest	7	223	May 28, 2025
Windows SCT v6.1 installation error: "git not found" even though git is installed	6	968	May 12, 2025
Problems with gray matter segmentation	16	608	April 29, 2025
Poor quality GM segmentation (missing slices) when using `sct_deepseg_gm`	6	865	April 29, 2025
Thoracic spine t2 vertebra labeling	19	1609	April 29, 2025
Binary mask-based methods or Atlas-based methods	9	302	April 29, 2025
Calculate CSA of the spinal canal and cord	8	309	April 29, 2025
Problems with installation of SCT-6.2	2	357	April 28, 2025
Problem installing sct v6.1	3	743	April 28, 2025
Doubt about rootlet segmentation	5	174	April 22, 2025

➤ New release: SCT v7.1

Dear SCT users, We are happy to announce the release of SCT v7.1. :tada: The most notable changes for this release include: Installation: Add support for Apptainer installations for use on HPC systems. View pull requ…

2

133

August 19, 2025

➤ New release: SCT v7.0

Dear SCT users, We are happy to announce the release of SCT v7.0. :tada: The most notable changes for this major release include: Feature: Overhauled sct_deepseg syntax, interface, and model names. View Model Gallery …

7

235

August 19, 2025

📣 New release: SCT v6.3

Dear SCT users, We are happy to announce the release of SCT v6.3. :tada: The most notable changes for this release include: Feature: Add QC report for sct_deepseg. View pull request Feature: Add CanProCo-based MS les…

3

567

August 9, 2024

New problems about the atlas pics