Latest MRI Processing & SCT topics

Topic	Replies	Views	Activity
➤ New release: SCT v7.1 Dear SCT users, We are happy to announce the release of SCT v7.1. :tada: The most notable changes for this release include: Installation: Add support for Apptainer installations for use on HPC systems. View pull requ…	4	542	April 7, 2026
Sct_register_to_template -lrootlet	7	225	April 17, 2026
Question re: template registration and GM/WM inaccuracy for MTR analysis (SCT v7.2)	6	83	April 9, 2026
FA values > 1.0 from MAP extraction	1	155	March 2, 2026
PAM50_t2 template contains signal outside spinal cord - impact on fMRI registration quality? registration	1	152	March 2, 2026
Error with sct_deepseg spinalcord - sct 7.2	4	167	February 18, 2026
Problem with sct_dmri_moco	6	488	February 12, 2026
Spinal cord morphometrics	5	287	February 4, 2026
Concatenating "parts" of spinal cord with unequal orientation registration	7	252	January 30, 2026
Accounting for Spinal Cord Orientation in Cross‑Sectional Area Measurements	1	216	January 26, 2026
Automated MRI quality-control	1	172	January 26, 2026
Implementing feature extraction	4	195	January 23, 2026
Unable to install SCT 7.2 on macOS 11 due to incompatible `wandb` package	11	752	December 8, 2025
SCT Workshop - software update	1	164	December 6, 2025
Display axial T2w images on axial direction using sct_label_utils	1	169	December 4, 2025
`GraalPy` causes `blosc2` to fail to install for SCT v7.1 installation	2	366	November 21, 2025
Fail to install SCT on Ubuntu 22.04	5	927	November 21, 2025
Image Type Recommendations for SCT DWI Registration registration	2	229	November 14, 2025
Seeking sct_register_to_template suggestions registration	1	318	October 28, 2025
New problems about the atlas pics	3	511	October 12, 2025
"No matching distribution found for onnxruntime==1.21.1" error when installing SCT v7.1	5	1409	October 10, 2025
Some problems with MSCC	3	378	September 24, 2025
"Joint PDF summed to zero" error at the motion correction step for DTI algorithm	4	1009	September 22, 2025
"Joint PDF summed to zero" error encountered during motion correction step	8	1513	September 3, 2025
How to compute CSA from brain data	4	1993	August 30, 2025
Some questions about the registering template to dMRI of lumbar enlargement area	13	945	August 19, 2025
Installing SCT-7.0; Undefined symbol in ../site-packages/PyQt5/QtCore.so	11	1002	August 19, 2025
Local DTI extraction results don't match the values given in the tutorial	2	423	August 17, 2025
"max() arg is an empty sequence" error during ANTs check in `sct_check_dependencies`	5	1083	August 17, 2025
How to stitch together different spinal cord segments' DTI images (e.g., cervical-thoracic, thoracic-lumbar)?	1	744	August 17, 2025

➤ New release: SCT v7.1

Dear SCT users, We are happy to announce the release of SCT v7.1. :tada: The most notable changes for this release include: Installation: Add support for Apptainer installations for use on HPC systems. View pull requ…