Latest SCT topics - Spinalcordmri.org

Topic	Replies	Views	Activity
➤ New release: SCT v7.1 Dear SCT users, We are happy to announce the release of SCT v7.1. :tada: The most notable changes for this release include: Installation: Add support for Apptainer installations for use on HPC systems. View pull requ…	2	89	August 19, 2025
➤ New release: SCT v7.0 Dear SCT users, We are happy to announce the release of SCT v7.0. :tada: The most notable changes for this major release include: Feature: Overhauled sct_deepseg syntax, interface, and model names. View Model Gallery …	7	208	August 19, 2025
📣 New release: SCT v6.3 Dear SCT users, We are happy to announce the release of SCT v6.3. :tada: The most notable changes for this release include: Feature: Add QC report for sct_deepseg. View pull request Feature: Add CanProCo-based MS les…	3	552	August 9, 2024
Error at the motion correction step for DTI algorithm	0	1	September 18, 2025
"Joint PDF summed to zero" error encountered during motion correction step	8	194	September 3, 2025
How to compute CSA from brain data	4	1608	August 30, 2025
Some questions about the registering template to dMRI of lumbar enlargement area	13	334	August 19, 2025
Installing SCT-7.0; Undefined symbol in ../site-packages/PyQt5/QtCore.so	11	299	August 19, 2025
Local DTI extraction results don't match the values given in the tutorial	2	82	August 17, 2025
"max() arg is an empty sequence" error during ANTs check in `sct_check_dependencies`	5	189	August 17, 2025
How to stitch together different spinal cord segments' DTI images (e.g., cervical-thoracic, thoracic-lumbar)?	1	119	August 17, 2025
How to upgrade SCT 6.4 to 7.0 on Windows	9	186	July 25, 2025
Can't install `sct_deepseg` task due to network errors	12	293	July 18, 2025
SCT v6.5 installation fails due to "failed to connect to github.com" error	11	225	July 10, 2025
Issue with C2-C5 volume	1	112	July 3, 2025
Issue with Motion correction and size of data	3	141	June 12, 2025
Issue installing sct 7.0 on linux	3	185	June 6, 2025
Issue with Spinal Cord Toolbox GPU Installation	2	190	May 29, 2025
Further subdivide the segmented gray matter and white matter regions of interest	7	196	May 28, 2025
Windows SCT v6.1 installation error: "git not found" even though git is installed	6	926	May 12, 2025
Problems with gray matter segmentation	16	588	April 29, 2025
Poor quality GM segmentation (missing slices) when using `sct_deepseg_gm`	6	845	April 29, 2025
Thoracic spine t2 vertebra labeling	19	1575	April 29, 2025
Binary mask-based methods or Atlas-based methods	9	289	April 29, 2025
Calculate CSA of the spinal canal and cord	8	290	April 29, 2025
Problems with installation of SCT-6.2	2	336	April 28, 2025
Problem installing sct v6.1	3	709	April 28, 2025
Doubt about rootlet segmentation	5	153	April 22, 2025
Contrast-agnostic-spinal-cord-v3.0 (r20250402)	3	169	April 17, 2025
Registering CEST slices to pam50 template	0	128	April 16, 2025

➤ New release: SCT v7.1

Dear SCT users, We are happy to announce the release of SCT v7.1. :tada: The most notable changes for this release include: Installation: Add support for Apptainer installations for use on HPC systems. View pull requ…

2

89

August 19, 2025

➤ New release: SCT v7.0

Dear SCT users, We are happy to announce the release of SCT v7.0. :tada: The most notable changes for this major release include: Feature: Overhauled sct_deepseg syntax, interface, and model names. View Model Gallery …

7

208

August 19, 2025

📣 New release: SCT v6.3

Dear SCT users, We are happy to announce the release of SCT v6.3. :tada: The most notable changes for this release include: Feature: Add QC report for sct_deepseg. View pull request Feature: Add CanProCo-based MS les…

3

552

August 9, 2024

Error at the motion correction step for DTI algorithm